CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSSARG00000013351
(
Sorex araneus
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
ENSSARG00000013351
T10471_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSARP00000012066
CCHC ZF
246
263
DSCFKCGQLGHWGSECPQ
Links
Other
CCHC ZF
family RBPs
Other
Sorex araneus
RBPs
11 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSSSCG00000005884
Sus scrofa
ENSSSCG00000005884
N
0.833
ENSCAFG00000001569
Canis familiaris
ENSCAFG00000001569
N
0.833
ENSPVAG00000006784
Pteropus vampyrus
ENSPVAG00000006784
N
0.833
ENSSSCG00000005898
Sus scrofa
ENSSSCG00000005898
N
0.833
ENSOPRG00000002588
Ochotona princeps
ENSOPRG00000002588
N
0.778
ENSMLUG00000011295
Myotis lucifugus
ENSMLUG00000011295
N
0.778
Recql4
Dipodomys ordii
ENSDORG00000002297
N
0.778
ENSDNOG00000002674
Dasypus novemcinctus
ENSDNOG00000002674
N
0.778
GRMZM2G069218
Zea mays
GRMZM2G069218
N
0.722
ENSECAG00000018665
Equus caballus
ENSECAG00000018665
N
0.722
ENSLAFG00000009512
Loxodonta africana
ENSLAFG00000009512
N
0.722