GSVIVG00034941001 (Vitis vinifera)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 GSVIVG00034941001 T10671_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GSVIVT00034941001 CCHC ZF 839 853

Links

Other CCHC ZF family RBPs
Other Vitis vinifera RBPs

22 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LjSGA_011995.1 Lotus japonicus LjSGA_011995.1 N 0.833
Medtr2g037320 Medicago truncatula Medtr2g037320 N 0.833
GRMZM2G063544 Zea mays GRMZM2G063544 N 0.778
MDP0000306612 Malus x domestica MDP0000306612 N 0.778
PDK_20s1341991g003 Phoenix dactylifera PDK_20s1341991g003 N 0.778
BGIOSIBCE036979 Oryza indica BGIOSIBCE036979 N 0.778
PK11905.1 Cannabis sativa PK11905.1 N 0.778
LOC_Os12g37720 Oryza sativa LOC_Os12g37720 N 0.778
GRMZM2G038516 Zea mays GRMZM2G038516 N 0.778
Cucsa.135100 Cucumis sativus Cucsa.135100 N 0.778
SB08G018400 Sorghum bicolor Sb08g018400 N 0.778
Glyma09g03670.1 Glycine max Glyma09g03670.1 N 0.778
Glyma15g14560.1 Glycine max Glyma15g14560.1 N 0.778
emb1441 Arabidopsis thaliana AT5G49930-TAIR-G N 0.722
B9HIJ8_POPTR Populus trichocarpa POPTR_0008s10060 N 0.722
XM_002865719.1 Arabidopsis lyrata fgenesh1_pm.C_scaffold_8000738 N 0.722
BRADI4G04650 Brachypodium distachyon BRADI4G04650 N 0.722
29889.m003353 Ricinus communis 29889.m003353 N 0.722
e_gw1.117.3.1 Physcomitrella patens e_gw1.117.3.1 N 0.722
cassava22294.valid.m1 Manihot esculenta cassava22294.valid.m1 N 0.722
mgf009291m Mimulus guttatus mgf009291m N 0.722
ppa000469m Prunus persica ppa000469m N 0.722