LOC_Os03g16420 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os03g16420 T10995_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os03g16420.1 CCHC ZF 272 289

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

6 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LOC_Os10g25990 Oryza sativa LOC_Os10g25990 N 0.833
estExt_fgenesh3_pg.C_320041 Postia placenta estExt_fgenesh3_pg.C_320041 N 0.778
CJA22679 Caenorhabditis japonica CJA22679 N 0.722
CJA21349 Caenorhabditis japonica CJA21349 N 0.722
PTTG_05279 Puccinia triticina PTTG_05279 N 0.722
PTTG_08980 Puccinia triticina PTTG_08980 N 0.722