mgf012653m (Mimulus guttatus)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 mgf012653m T14641_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
mgf012653m CCHC ZF 619 636

Links

Other CCHC ZF family RBPs
Other Mimulus guttatus RBPs

19 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LjB06P23.40.nc Lotus japonicus LjB06P23.40.nc N 0.833
BGIOSIBCE013536 Oryza indica BGIOSIBCE013536 N 0.778
Sb01g002660 Sorghum bicolor Sb01g002660 N 0.778
LOC_Os03g61220 Oryza sativa LOC_Os03g61220 N 0.778
cassava12877.valid.m1 Manihot esculenta cassava12877.valid.m1 N 0.778
ppa001778m Prunus persica ppa001778m N 0.778
GRMZM2G415491 Zea mays GRMZM2G415491 N 0.778
mgf008200m Mimulus guttatus mgf008200m N 0.778
Glyma19g41150.1 Glycine max Glyma19g41150.1 N 0.778
B9N3Y9_POPTR Populus trichocarpa POPTR_0005s00200 N 0.722
B9N3Z3_POPTR Populus trichocarpa POPTR_0005s00240 N 0.722
Glyma03g38550.1 Glycine max Glyma03g38550.1 N 0.722
BRADI1G03180 Brachypodium distachyon BRADI1G03180 N 0.722
Medtr7g134530 Medicago truncatula Medtr7g134530 N 0.722
Medtr1g103590 Medicago truncatula Medtr1g103590 N 0.722
PTTG_01306 Puccinia triticina PTTG_01306 N 0.722
PK16552.1 Cannabis sativa PK16552.1 N 0.722
GRMZM2G163072 Zea mays GRMZM2G163072 N 0.722
GSVIVG00031360001 Vitis vinifera GSVIVG00031360001 N 0.722