NCBI_GNO_26900002 (Daphnia pulex)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 NCBI_GNO_26900002 T14702_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
NCBI_GNO_26900002 CCHC ZF 453 470

Links

Other CCHC ZF family RBPs
Other Daphnia pulex RBPs

24 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
fgenesh1_pg.C_scaffold_64000087 Daphnia pulex fgenesh1_pg.C_scaffold_64000087 N 1.000
fgenesh1_pg.C_scaffold_195000001 Daphnia pulex fgenesh1_pg.C_scaffold_195000001 N 1.000
NCBI_GNO_2600182 Daphnia pulex NCBI_GNO_2600182 N 1.000
fgenesh1_pg.C_scaffold_33000112 Daphnia pulex fgenesh1_pg.C_scaffold_33000112 N 0.722
fgenesh1_pg.C_scaffold_26000082 Daphnia pulex fgenesh1_pg.C_scaffold_26000082 N 0.722
fgenesh1_pg.C_scaffold_205000008 Daphnia pulex fgenesh1_pg.C_scaffold_205000008 N 0.722
fgenesh1_pg.C_scaffold_386000003 Daphnia pulex fgenesh1_pg.C_scaffold_386000003 N 0.722
fgenesh1_pg.C_scaffold_601000001 Daphnia pulex fgenesh1_pg.C_scaffold_601000001 N 0.722
fgenesh1_pg.C_scaffold_93000071 Daphnia pulex fgenesh1_pg.C_scaffold_93000071 N 0.722
fgenesh1_pg.C_scaffold_829000002 Daphnia pulex fgenesh1_pg.C_scaffold_829000002 N 0.722
fgenesh1_pg.C_scaffold_140000007 Daphnia pulex fgenesh1_pg.C_scaffold_140000007 N 0.722
fgenesh1_pg.C_scaffold_421000001 Daphnia pulex fgenesh1_pg.C_scaffold_421000001 N 0.722
SNAP_00040202 Daphnia pulex SNAP_00040202 N 0.722
SNAP_00029886 Daphnia pulex SNAP_00029886 N 0.722
SNAP_00021967 Daphnia pulex SNAP_00021967 N 0.722
SNAP_00020521 Daphnia pulex SNAP_00020521 N 0.722
PASA_GEN_343200001 Daphnia pulex PASA_GEN_343200001 N 0.722
SNAP_00029977 Daphnia pulex SNAP_00029977 N 0.722
SNAP_00031168 Daphnia pulex SNAP_00031168 N 0.722
SNAP_00039286 Daphnia pulex SNAP_00039286 N 0.722
SNAP_00038773 Daphnia pulex SNAP_00038773 N 0.722
SNAP_00037736 Daphnia pulex SNAP_00037736 N 0.722
SNAP_00033377 Daphnia pulex SNAP_00033377 N 0.722
NCBI_GNO_456000001 Daphnia pulex NCBI_GNO_456000001 N 0.722