s_452594 (Phytophthora sojae)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 s_452594 T14801_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
s_452594 CCHC ZF 229 246

Links

Other CCHC ZF family RBPs
Other Phytophthora sojae RBPs

36 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
s_462797 Phytophthora sojae s_462797 N 1.000
s_477701 Phytophthora sojae s_477701 N 1.000
s_463332 Phytophthora sojae s_463332 N 1.000
s_464205 Phytophthora sojae s_464205 N 1.000
s_517718 Phytophthora sojae s_517718 N 1.000
s_452714 Phytophthora sojae s_452714 N 1.000
s_440041 Phytophthora sojae s_440041 N 1.000
s_461682 Phytophthora sojae s_461682 N 1.000
s_445549 Phytophthora sojae s_445549 N 1.000
s_455924 Phytophthora sojae s_455924 N 1.000
s_445517 Phytophthora sojae s_445517 N 1.000
s_471643 Phytophthora sojae s_471643 N 0.944
s_473180 Phytophthora sojae s_473180 N 0.944
s_455072 Phytophthora sojae s_455072 N 0.944
s_439369 Phytophthora sojae s_439369 N 0.944
s_459202 Phytophthora sojae s_459202 N 0.944
s_445656 Phytophthora sojae s_445656 N 0.944
s_459016 Phytophthora sojae s_459016 N 0.944
fgenesh1_pg.C_scaffold_2853000001 Phytophthora ramorum fgenesh1_pg.C_scaffold_2853000001 N 0.889
fgenesh1_pg.C_scaffold_305000001 Phytophthora ramorum fgenesh1_pg.C_scaffold_305000001 N 0.889
s_446612 Phytophthora sojae s_446612 N 0.889
s_469409 Phytophthora sojae s_469409 N 0.889
s_456636 Phytophthora sojae s_456636 N 0.889
s_466998 Phytophthora sojae s_466998 N 0.889
s_469013 Phytophthora sojae s_469013 N 0.889
s_455576 Phytophthora sojae s_455576 N 0.833
s_438716 Phytophthora sojae s_438716 N 0.833
s_469380 Phytophthora sojae s_469380 N 0.833
s_455516 Phytophthora sojae s_455516 N 0.778
s_452989 Phytophthora sojae s_452989 N 0.778
s_446687 Phytophthora sojae s_446687 N 0.778
s_471430 Phytophthora sojae s_471430 N 0.778
fgenesh1_pg.C_scaffold_999000001 Phytophthora ramorum fgenesh1_pg.C_scaffold_999000001 N 0.778
fgenesh1_pg.C_scaffold_373000003 Phytophthora ramorum fgenesh1_pg.C_scaffold_373000003 N 0.778
s_457020 Phytophthora sojae s_457020 N 0.778
s_477555 Phytophthora sojae s_477555 N 0.778