s_473180 (Phytophthora sojae)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 s_473180 T14906_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
s_473180 CCHC ZF 221 238

Links

Other CCHC ZF family RBPs
Other Phytophthora sojae RBPs

36 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
s_459016 Phytophthora sojae s_459016 N 1.000
s_459202 Phytophthora sojae s_459202 N 1.000
s_471643 Phytophthora sojae s_471643 N 1.000
s_456636 Phytophthora sojae s_456636 N 0.944
s_455924 Phytophthora sojae s_455924 N 0.944
s_452714 Phytophthora sojae s_452714 N 0.944
s_464205 Phytophthora sojae s_464205 N 0.944
s_463332 Phytophthora sojae s_463332 N 0.944
s_461682 Phytophthora sojae s_461682 N 0.944
s_446612 Phytophthora sojae s_446612 N 0.944
s_462797 Phytophthora sojae s_462797 N 0.944
s_452594 Phytophthora sojae s_452594 N 0.944
s_517718 Phytophthora sojae s_517718 N 0.944
s_477701 Phytophthora sojae s_477701 N 0.944
s_445517 Phytophthora sojae s_445517 N 0.944
s_440041 Phytophthora sojae s_440041 N 0.944
s_445549 Phytophthora sojae s_445549 N 0.944
s_439369 Phytophthora sojae s_439369 N 0.889
s_445656 Phytophthora sojae s_445656 N 0.889
s_469380 Phytophthora sojae s_469380 N 0.889
s_455072 Phytophthora sojae s_455072 N 0.889
fgenesh1_pg.C_scaffold_305000001 Phytophthora ramorum fgenesh1_pg.C_scaffold_305000001 N 0.833
fgenesh1_pg.C_scaffold_2853000001 Phytophthora ramorum fgenesh1_pg.C_scaffold_2853000001 N 0.833
s_477555 Phytophthora sojae s_477555 N 0.833
s_469013 Phytophthora sojae s_469013 N 0.833
s_469409 Phytophthora sojae s_469409 N 0.833
s_446687 Phytophthora sojae s_446687 N 0.833
s_466998 Phytophthora sojae s_466998 N 0.833
s_438716 Phytophthora sojae s_438716 N 0.778
s_455576 Phytophthora sojae s_455576 N 0.778
s_471430 Phytophthora sojae s_471430 N 0.722
s_452989 Phytophthora sojae s_452989 N 0.722
fgenesh1_pg.C_scaffold_373000003 Phytophthora ramorum fgenesh1_pg.C_scaffold_373000003 N 0.722
fgenesh1_pg.C_scaffold_999000001 Phytophthora ramorum fgenesh1_pg.C_scaffold_999000001 N 0.722
s_455516 Phytophthora sojae s_455516 N 0.722
s_457020 Phytophthora sojae s_457020 N 0.722