s_477555 (Phytophthora sojae)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 s_477555 T14925_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
s_477555 CCHC ZF 229 243

Links

Other CCHC ZF family RBPs
Other Phytophthora sojae RBPs

28 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
s_457020 Phytophthora sojae s_457020 N 0.867
s_455516 Phytophthora sojae s_455516 N 0.867
s_459016 Phytophthora sojae s_459016 N 0.833
s_459202 Phytophthora sojae s_459202 N 0.833
s_471643 Phytophthora sojae s_471643 N 0.833
s_473180 Phytophthora sojae s_473180 N 0.833
s_517718 Phytophthora sojae s_517718 N 0.778
s_456636 Phytophthora sojae s_456636 N 0.778
s_462797 Phytophthora sojae s_462797 N 0.778
s_464205 Phytophthora sojae s_464205 N 0.778
s_463332 Phytophthora sojae s_463332 N 0.778
s_477701 Phytophthora sojae s_477701 N 0.778
s_461682 Phytophthora sojae s_461682 N 0.778
s_455924 Phytophthora sojae s_455924 N 0.778
s_445517 Phytophthora sojae s_445517 N 0.778
s_440041 Phytophthora sojae s_440041 N 0.778
s_446612 Phytophthora sojae s_446612 N 0.778
s_445549 Phytophthora sojae s_445549 N 0.778
s_452714 Phytophthora sojae s_452714 N 0.778
s_452594 Phytophthora sojae s_452594 N 0.778
s_469380 Phytophthora sojae s_469380 N 0.722
s_439369 Phytophthora sojae s_439369 N 0.722
fgenesh1_pg.C_scaffold_305000001 Phytophthora ramorum fgenesh1_pg.C_scaffold_305000001 N 0.722
s_469013 Phytophthora sojae s_469013 N 0.722
s_455072 Phytophthora sojae s_455072 N 0.722
s_445656 Phytophthora sojae s_445656 N 0.722
fgenesh1_pg.C_scaffold_2853000001 Phytophthora ramorum fgenesh1_pg.C_scaffold_2853000001 N 0.722
s_466998 Phytophthora sojae s_466998 N 0.722