CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CSDC2
(
Canis familiaris
)
CSD
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00313 (CSD)
IPR002059
ENSCAFG00000001051
T16759_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCAFP00000001486
CSD
68
136
VFKGVCKQFSRSQGHGFITPENGSEDIFVHVSDNIQGEYLPMESHQVTYKMCPIPPKNQKFQAVEVVLT
Links
Other
CSD
family RBPs
Other
Canis familiaris
RBPs
37 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Csdc2
Rattus norvegicus
ENSRNOG00000005332
N
0.899
CSDC2
Sus scrofa
ENSSSCG00000000062
N
0.899
CSDC2
Loxodonta africana
ENSLAFG00000027155
N
0.899
CSDC2
Pteropus vampyrus
ENSPVAG00000001165
N
0.899
CSDC2
Macaca mulatta
ENSMMUG00000001852
N
0.899
CSDC2
Ochotona princeps
ENSOPRG00000010664
N
0.899
CSDC2
Procavia capensis
ENSPCAG00000014857
N
0.899
ENSPPYG00000011873
Pongo pygmaeus
ENSPPYG00000011873
N
0.899
CSDC2
Tupaia belangeri
ENSTBEG00000011596
N
0.899
CSDC2
Tursiops truncatus
ENSTTRG00000006736
N
0.899
CSDC2
Erinaceus europaeus
ENSEEUG00000003639
N
0.899
LOC100070658
Equus caballus
ENSECAG00000022234
N
0.899
Csdc2
Dipodomys ordii
ENSDORG00000011754
N
0.899
CSDC2
Cavia porcellus
ENSCPOG00000025372
N
0.899
CSDC2
Echinops telfairi
ENSETEG00000019516
N
0.899
CSDC2
Homo sapiens
ENSG00000172346
N
0.899
CSDC2
Felis catus
ENSFCAG00000003677
N
0.899
Ame_R018068
Ailuropoda melanoleuca
Ame_R018068
N
0.899
CSDC2
Microcebus murinus
ENSMICG00000005978
N
0.886
CSDC2
Otolemur garnettii
ENSOGAG00000002852
N
0.884
Csdc2
Mus musculus
ENSMUSG00000042109
N
0.884
CSDC2
Macropus eugenii
ENSMEUG00000002050
N
0.884
CSDC2
Oryctolagus cuniculus
ENSOCUG00000006938
N
0.884
CSDC2
Myotis lucifugus
ENSMLUG00000002495
N
0.884
CSDC2
Monodelphis domestica
ENSMODG00000016565
N
0.884
LOC100400889
Callithrix jacchus
ENSCJAG00000002580
N
0.884
Q08E16_BOVIN
Bos taurus
ENSBTAG00000004004
N
0.870
CSDC2
Anolis carolinensis
ENSACAG00000004668
N
0.870
CSDC2
Taeniopygia guttata
ENSTGUG00000009898
N
0.855
CSDC2
Gallus gallus
ENSGALG00000000049
N
0.841
CSDC2
Meleagris gallopavo
ENSMGAG00000012131
N
0.841
CSDC2
Gasterosteus aculeatus
ENSGACG00000004665
N
0.757
CSDC2
Tetraodon nigroviridis
ENSTNIG00000012937
N
0.757
CSDC2
Takifugu rubripes
ENSTRUG00000017020
N
0.743
CSDC2
Oryzias latipes
ENSORLG00000002636
N
0.743
csdc2
Danio rerio
ENSDARG00000041323
N
0.729
CSDC2
Tetraodon nigroviridis
ENSTNIG00000004955
N
0.714