CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
CSDC2
(
Gallus gallus
)
CSD
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00313 (CSD)
IPR002059
ENSGALG00000000049
T16865_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGALP00000000063
CSD
77
144
IYKGVCKQFSRSQGHGFITPENGTEDIFVHVSDIEGEYVPVEGDEVTYKVCPIPPKNQKFQAVEVVLT
Links
Other
CSD
family RBPs
Other
Gallus gallus
RBPs
78 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CSDC2
Meleagris gallopavo
ENSMGAG00000012131
N
1.000
CSDC2
Taeniopygia guttata
ENSTGUG00000009898
N
0.985
CSDC2
Monodelphis domestica
ENSMODG00000016565
N
0.956
CSDC2
Macropus eugenii
ENSMEUG00000002050
N
0.956
Csdc2
Dipodomys ordii
ENSDORG00000011754
N
0.941
CSDC2
Erinaceus europaeus
ENSEEUG00000003639
N
0.941
ENSPPYG00000011873
Pongo pygmaeus
ENSPPYG00000011873
N
0.941
CSDC2
Echinops telfairi
ENSETEG00000019516
N
0.941
CSDC2
Ochotona princeps
ENSOPRG00000010664
N
0.941
CSDC2
Procavia capensis
ENSPCAG00000014857
N
0.941
Csdc2
Rattus norvegicus
ENSRNOG00000005332
N
0.941
CSDC2
Tupaia belangeri
ENSTBEG00000011596
N
0.941
CSDC2
Cavia porcellus
ENSCPOG00000025372
N
0.941
CSDC2
Anolis carolinensis
ENSACAG00000004668
N
0.941
LOC100070658
Equus caballus
ENSECAG00000022234
N
0.941
Ame_R018068
Ailuropoda melanoleuca
Ame_R018068
N
0.941
CSDC2
Tursiops truncatus
ENSTTRG00000006736
N
0.941
Q08E16_BOVIN
Bos taurus
ENSBTAG00000004004
N
0.941
CSDC2
Felis catus
ENSFCAG00000003677
N
0.941
CSDC2
Sus scrofa
ENSSSCG00000000062
N
0.941
CSDC2
Pteropus vampyrus
ENSPVAG00000001165
N
0.941
CSDC2
Homo sapiens
ENSG00000172346
N
0.941
CSDC2
Macaca mulatta
ENSMMUG00000001852
N
0.941
CSDC2
Loxodonta africana
ENSLAFG00000027155
N
0.941
Csdc2
Mus musculus
ENSMUSG00000042109
N
0.941
CSDC2
Microcebus murinus
ENSMICG00000005978
N
0.928
CSDC2
Otolemur garnettii
ENSOGAG00000002852
N
0.926
CSDC2
Oryctolagus cuniculus
ENSOCUG00000006938
N
0.926
LOC100400889
Callithrix jacchus
ENSCJAG00000002580
N
0.926
CSDC2
Myotis lucifugus
ENSMLUG00000002495
N
0.926
CSDC2
Tetraodon nigroviridis
ENSTNIG00000012937
N
0.855
CSDC2
Gasterosteus aculeatus
ENSGACG00000004665
N
0.855
CSDC2
Canis familiaris
ENSCAFG00000001051
N
0.841
CSDC2
Oryzias latipes
ENSORLG00000002636
N
0.826
CSDC2
Takifugu rubripes
ENSTRUG00000017020
N
0.826
csdc2
Danio rerio
ENSDARG00000041323
N
0.812
CSDC2
Tetraodon nigroviridis
ENSTNIG00000004955
N
0.797
CARHSP1
Taeniopygia guttata
ENSTGUG00000004665
N
0.783
ENSMGAG00000008554
Meleagris gallopavo
ENSMGAG00000008554
N
0.783
CARHSP1
Gallus gallus
ENSGALG00000007313
N
0.783
CARHSP1
Procavia capensis
ENSPCAG00000002081
N
0.768
CSDC2
Oryzias latipes
ENSORLG00000014166
N
0.768
CSDC2
Takifugu rubripes
ENSTRUG00000004175
N
0.768
CARHSP1
Sus scrofa
ENSSSCG00000007911
N
0.768
CARHSP1
Canis familiaris
ENSCAFG00000019003
N
0.754
CSDC2
Danio rerio
ENSDARG00000068477
N
0.754
LOC100051399
Equus caballus
ENSECAG00000019386
N
0.754
LOC100410498
Callithrix jacchus
ENSCJAG00000017286
N
0.754
CARHSP1
Ornithorhynchus anatinus
ENSOANG00000008257
N
0.754
CARHSP1
Cavia porcellus
ENSCPOG00000025492
N
0.754
LOC100395892
Callithrix jacchus
ENSCJAG00000022227
N
0.754
CARHSP1
Ochotona princeps
ENSOPRG00000010356
N
0.754
AAH84399
Xenopus laevis
AAH84399
N
0.754
XM_001367025.1
Monodelphis domestica
ENSMODG00000005721
N
0.754
Carhsp1
Rattus norvegicus
ENSRNOG00000002610
N
0.754
CARHSP1
Macaca mulatta
ENSMMUG00000021565
N
0.754
CARHSP1
Myotis lucifugus
ENSMLUG00000009734
N
0.754
Carhsp1
Mus musculus
ENSMUSG00000008393
N
0.754
CARHSP1
Homo sapiens
ENSG00000153048
N
0.754
CARHSP1
Spermophilus tridecemlineatus
ENSSTOG00000007008
N
0.754
CARHSP1
Pan troglodytes
ENSPTRG00000007749
N
0.754
Ame_R007806
Ailuropoda melanoleuca
Ame_R007806
N
0.754
CARHSP1
Tursiops truncatus
ENSTTRG00000014828
N
0.754
CSDC2
Gasterosteus aculeatus
ENSGACG00000007540
N
0.739
CARHSP1
Tupaia belangeri
ENSTBEG00000005777
N
0.739
CARHSP1
Otolemur garnettii
ENSOGAG00000014708
N
0.739
CARHSP1
Macropus eugenii
ENSMEUG00000016403
N
0.739
Q2NKU4_BOVIN
Bos taurus
ENSBTAG00000001441
N
0.739
CARHSP1
Microcebus murinus
ENSMICG00000006185
N
0.739
CARHSP1
Dasypus novemcinctus
ENSDNOG00000024912
N
0.739
XM_001363201.1
Monodelphis domestica
ENSMODG00000024949
N
0.725
CARHSP1
Echinops telfairi
ENSETEG00000008180
N
0.725
CARHSP1
Gasterosteus aculeatus
ENSGACG00000005857
N
0.725
CARHSP1
Pteropus vampyrus
ENSPVAG00000003125
N
0.725
CARHSP1
Loxodonta africana
ENSLAFG00000022498
N
0.721
CARHSP1
Felis catus
ENSFCAG00000003289
N
0.710
carhsp1
Danio rerio
ENSDARG00000053129
N
0.710
ENSPPYG00000007085
Pongo pygmaeus
ENSPPYG00000007085
N
0.710