LIN28A (Spermophilus tridecemlineatus)
CSD

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00313 (CSD) IPR002059 ENSSTOG00000004329 T17026_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSSTOP00000003875 CSD 33 105

Links

Other CSD family RBPs
Other Spermophilus tridecemlineatus RBPs

8 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LIN28A Vicugna pacos ENSVPAG00000008073 N 1.000
LIN28A Tarsius syrichta ENSTSYG00000011513 N 1.000
LOC100410228 Callithrix jacchus ENSCJAG00000022770 N 0.959
LIN28B Choloepus hoffmanni ENSCHOG00000001682 N 0.824
ENSOCUG00000011640 Oryctolagus cuniculus ENSOCUG00000011640 N 0.808
LIN28A Otolemur garnettii ENSOGAG00000003971 N 0.762
lin28a Danio rerio ENSDARG00000016999 I 0.743
Lin28b Mus musculus ENSMUSG00000063804 I 0.712