CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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HNRNPK
(
Myotis lucifugus
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
ENSMLUG00000005871
T19033_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
hnRNPK
M026_0.6
Homo sapiens
CCAWMCC
RNAcompete
Ray et al.(2013)
RNCMPT00026
0.707
For this family, RBPs with RBD identity >
0.7
will likely have a similar motif
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMLUP00000005368
KH
44
93
ELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERXXXXXXX
ENSMLUP00000005368
KH
146
174
ELRLLIHQSLAGGIIGVKGAKIKELREXX
ENSMLUP00000005368
KH
388
450
TTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLL
Links
Other
KH
family RBPs
Other
Myotis lucifugus
RBPs
32 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSCPOG00000005024
Cavia porcellus
ENSCPOG00000005024
I
0.864
hnrnpk
Xenopus tropicalis
ENSXETG00000011722
I
0.720
HNRNPK
Choloepus hoffmanni
ENSCHOG00000010832
I
0.707
HNRNPK
Callithrix jacchus
ENSCJAG00000003750
I
0.707
HNRPK_BOVIN
Bos taurus
ENSBTAG00000021131
I
0.707
HNRNPK
Anolis carolinensis
ENSACAG00000001479
I
0.707
HNRNPK
Monodelphis domestica
ENSMODG00000018992
I
0.707
ENSMODG00000008402
Monodelphis domestica
ENSMODG00000008402
I
0.707
HNRNPK
Equus caballus
ENSECAG00000025104
I
0.707
HNRNPK
Gorilla gorilla
ENSGGOG00000015500
I
0.707
HNRNPK
Macropus eugenii
ENSMEUG00000006975
I
0.707
HNRPK_CHICK
Gallus gallus
ENSGALG00000014366
I
0.707
HNRNPK
Gallus gallus
ENSGALG00000012591
I
0.707
hnRNPK
Homo sapiens
ENSG00000165119
D
0.707
ENSMMUG00000018871
Macaca mulatta
ENSMMUG00000018871
I
0.707
Ame_R002812
Ailuropoda melanoleuca
Ame_R002812
I
0.707
HNRNPK
Otolemur garnettii
ENSOGAG00000007478
I
0.707
HNRPK_RABIT
Oryctolagus cuniculus
ENSOCUG00000010364
I
0.707
HNRNPK
Ornithorhynchus anatinus
ENSOANG00000014612
I
0.707
Hnrnpk
Mus musculus
ENSMUSG00000021546
I
0.707
HNRNPK
Tursiops truncatus
ENSTTRG00000016693
I
0.707
ENSPPYG00000019327
Pongo pygmaeus
ENSPPYG00000019327
I
0.707
HNRNPK
Tarsius syrichta
ENSTSYG00000001196
I
0.707
HNRNPK
Taeniopygia guttata
ENSTGUG00000003138
I
0.707
Hnrnpk
Rattus norvegicus
ENSRNOG00000019113
I
0.707
HNRNPK
Pan troglodytes
ENSPTRG00000021061
I
0.707
HNRNPK
Loxodonta africana
ENSLAFG00000026567
I
0.702
Gm7964
Mus musculus
ENSMUSG00000063902
I
0.702
HNRNPK
Takifugu rubripes
ENSTRUG00000000535
I
0.702
hnrpkl
Danio rerio
ENSDARG00000007034
I
0.702
HNRNPK
Erinaceus europaeus
ENSEEUG00000014624
I
0.702
HNRNPK
Echinops telfairi
ENSETEG00000016294
I
0.702