hnrpkl (Danio rerio)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSDARG00000007034 T18608_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
hnRNPK
M026_0.6 		Homo sapiens CCAWMCC RNAcompete
Ray et al.(2013)
RNCMPT00026 		0.963
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000008648 KH 45 105
ENSDARP00000008648 KH 123 186
ENSDARP00000008648 KH 357 419
ENSDARP00000059789 KH 45 105
ENSDARP00000059789 KH 123 186
ENSDARP00000059789 KH 357 419
ENSDARP00000065574 KH 45 80

Links

Other KH family RBPs
Other Danio rerio RBPs

54 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
HNRNPK Takifugu rubripes ENSTRUG00000000535 I 0.968
HNRNPK Choloepus hoffmanni ENSCHOG00000010832 I 0.963
HNRPK_RABIT Oryctolagus cuniculus ENSOCUG00000010364 I 0.963
HNRNPK Ornithorhynchus anatinus ENSOANG00000014612 I 0.963
HNRNPK Monodelphis domestica ENSMODG00000018992 I 0.963
Hnrnpk Mus musculus ENSMUSG00000021546 I 0.963
HNRNPK Pan troglodytes ENSPTRG00000021061 I 0.963
HNRNPK Tarsius syrichta ENSTSYG00000001196 I 0.963
Ame_R002812 Ailuropoda melanoleuca Ame_R002812 I 0.963
HNRNPK Taeniopygia guttata ENSTGUG00000003138 I 0.963
Hnrnpk Rattus norvegicus ENSRNOG00000019113 I 0.963
ENSMODG00000008402 Monodelphis domestica ENSMODG00000008402 I 0.963
ENSPPYG00000019327 Pongo pygmaeus ENSPPYG00000019327 I 0.963
HNRNPK Otolemur garnettii ENSOGAG00000007478 I 0.963
HNRNPK Gorilla gorilla ENSGGOG00000015500 I 0.963
hnRNPK Homo sapiens ENSG00000165119 D 0.963
HNRNPK Gallus gallus ENSGALG00000012591 I 0.963
HNRNPK Equus caballus ENSECAG00000025104 I 0.963
ENSMMUG00000018871 Macaca mulatta ENSMMUG00000018871 I 0.963
HNRNPK Callithrix jacchus ENSCJAG00000003750 I 0.963
HNRNPK Macropus eugenii ENSMEUG00000006975 I 0.963
HNRNPK Erinaceus europaeus ENSEEUG00000014624 I 0.957
HNRNPK Tursiops truncatus ENSTTRG00000016693 I 0.957
HNRPK_BOVIN Bos taurus ENSBTAG00000021131 I 0.957
HNRPK_CHICK Gallus gallus ENSGALG00000014366 I 0.957
HNRNPK Echinops telfairi ENSETEG00000016294 I 0.957
HNRNPK Anolis carolinensis ENSACAG00000001479 I 0.957
HNRNPK Loxodonta africana ENSLAFG00000026567 I 0.957
Gm7964 Mus musculus ENSMUSG00000063902 I 0.952
AAH44711 Xenopus laevis AAH44711 I 0.952
HNRNPK Tupaia belangeri ENSTBEG00000001289 I 0.941
ENSTTRG00000004906 Tursiops truncatus ENSTTRG00000004906 I 0.941
AAB26047 Xenopus laevis AAB26047 I 0.941
XM_533511.2 Canis familiaris ENSCAFG00000001399 I 0.941
HNRNPK Gasterosteus aculeatus ENSGACG00000007581 I 0.936
HNRNPK Oryzias latipes ENSORLG00000005161 I 0.931
XM_855974.1 Canis familiaris ENSCAFG00000017503 I 0.926
HNRNPK Takifugu rubripes ENSTRUG00000010659 I 0.920
hnrnpk Danio rerio ENSDARG00000018914 I 0.920
HNRNPK Tetraodon nigroviridis ENSTNIG00000006005 I 0.920
hnrnpk Xenopus tropicalis ENSXETG00000011722 I 0.915
HNRNPK Pteropus vampyrus ENSPVAG00000009078 I 0.915
HNRNPK Felis catus ENSFCAG00000014862 I 0.915
ENSPPYG00000013626 Pongo pygmaeus ENSPPYG00000013626 I 0.910
ENSOCUG00000025925 Oryctolagus cuniculus ENSOCUG00000025925 I 0.883
HNRNPK Oryzias latipes ENSORLG00000004704 I 0.851
D3ZJL5_RAT Rattus norvegicus ENSRNOG00000029014 I 0.851
ENSRNOG00000013016 Rattus norvegicus ENSRNOG00000013016 I 0.840
HNRNPK Tetraodon nigroviridis ENSTNIG00000007554 I 0.809
HNRNPK Procavia capensis ENSPCAG00000016196 I 0.803
HNRNPK Ochotona princeps ENSOPRG00000015723 I 0.803
ENSCPOG00000005024 Cavia porcellus ENSCPOG00000005024 I 0.782
HNRNPK Myotis lucifugus ENSMLUG00000005871 I 0.702