CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSCPOG00000005024
(
Cavia porcellus
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
ENSCPOG00000005024
T18569_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
hnRNPK
M026_0.6
Homo sapiens
CCAWMCC
RNAcompete
Ray et al.(2013)
RNCMPT00026
0.803
For this family, RBPs with RBD identity >
0.7
will likely have a similar motif
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCPOP00000004522
KH
44
104
ELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKI
ENSCPOP00000004522
KH
146
173
ELRLLIHQSLAGGIIGVKGAKIKELREV
ENSCPOP00000004522
KH
280
342
TTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLL
Links
Other
KH
family RBPs
Other
Cavia porcellus
RBPs
47 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
HNRNPK
Myotis lucifugus
ENSMLUG00000005871
I
0.864
hnrnpk
Xenopus tropicalis
ENSXETG00000011722
I
0.819
HNRPK_BOVIN
Bos taurus
ENSBTAG00000021131
I
0.803
HNRNPK
Otolemur garnettii
ENSOGAG00000007478
I
0.803
HNRPK_RABIT
Oryctolagus cuniculus
ENSOCUG00000010364
I
0.803
HNRNPK
Ornithorhynchus anatinus
ENSOANG00000014612
I
0.803
HNRNPK
Anolis carolinensis
ENSACAG00000001479
I
0.803
Hnrnpk
Mus musculus
ENSMUSG00000021546
I
0.803
ENSPPYG00000019327
Pongo pygmaeus
ENSPPYG00000019327
I
0.803
HNRNPK
Taeniopygia guttata
ENSTGUG00000003138
I
0.803
HNRNPK
Tursiops truncatus
ENSTTRG00000016693
I
0.803
Ame_R002812
Ailuropoda melanoleuca
Ame_R002812
I
0.803
Hnrnpk
Rattus norvegicus
ENSRNOG00000019113
I
0.803
HNRNPK
Pan troglodytes
ENSPTRG00000021061
I
0.803
HNRNPK
Tarsius syrichta
ENSTSYG00000001196
I
0.803
HNRNPK
Monodelphis domestica
ENSMODG00000018992
I
0.803
ENSMODG00000008402
Monodelphis domestica
ENSMODG00000008402
I
0.803
hnRNPK
Homo sapiens
ENSG00000165119
D
0.803
HNRNPK
Callithrix jacchus
ENSCJAG00000003750
I
0.803
HNRNPK
Choloepus hoffmanni
ENSCHOG00000010832
I
0.803
HNRNPK
Equus caballus
ENSECAG00000025104
I
0.803
HNRNPK
Gallus gallus
ENSGALG00000012591
I
0.803
ENSMMUG00000018871
Macaca mulatta
ENSMMUG00000018871
I
0.803
HNRNPK
Macropus eugenii
ENSMEUG00000006975
I
0.803
HNRNPK
Gorilla gorilla
ENSGGOG00000015500
I
0.803
HNRNPK
Echinops telfairi
ENSETEG00000016294
I
0.798
HNRNPK
Erinaceus europaeus
ENSEEUG00000014624
I
0.798
Gm7964
Mus musculus
ENSMUSG00000063902
I
0.798
HNRNPK
Loxodonta africana
ENSLAFG00000026567
I
0.798
HNRPK_CHICK
Gallus gallus
ENSGALG00000014366
I
0.798
ENSTTRG00000004906
Tursiops truncatus
ENSTTRG00000004906
I
0.793
AAH44711
Xenopus laevis
AAH44711
I
0.787
AAB26047
Xenopus laevis
AAB26047
I
0.787
XM_533511.2
Canis familiaris
ENSCAFG00000001399
I
0.782
HNRNPK
Oryzias latipes
ENSORLG00000005161
I
0.782
hnrpkl
Danio rerio
ENSDARG00000007034
I
0.782
HNRNPK
Gasterosteus aculeatus
ENSGACG00000007581
I
0.782
HNRNPK
Tupaia belangeri
ENSTBEG00000001289
I
0.782
XM_855974.1
Canis familiaris
ENSCAFG00000017503
I
0.771
HNRNPK
Takifugu rubripes
ENSTRUG00000000535
I
0.766
HNRNPK
Takifugu rubripes
ENSTRUG00000010659
I
0.761
HNRNPK
Tetraodon nigroviridis
ENSTNIG00000006005
I
0.761
HNRNPK
Felis catus
ENSFCAG00000014862
I
0.755
HNRNPK
Pteropus vampyrus
ENSPVAG00000009078
I
0.750
hnrnpk
Danio rerio
ENSDARG00000018914
I
0.750
ENSPPYG00000013626
Pongo pygmaeus
ENSPPYG00000013626
I
0.745
ENSOCUG00000025925
Oryctolagus cuniculus
ENSOCUG00000025925
I
0.734