FMR1 (Monodelphis domestica)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSMODG00000005550 T19092_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
FMR1
M305_0.6 		Homo sapiens Sequence logo not available KAGCGRCUGG SELEX
Cook et al.(2011)
471_15805463.1 		0.736
FMR1
M304_0.6 		Homo sapiens Sequence logo not available GGGCKAAGGARK SELEX
Cook et al.(2011)
471_15805463 		0.736
FMR1
M016_0.6 		Homo sapiens KGACARG RNAcompete
Ray et al.(2013)
RNCMPT00016 		0.736
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMODP00000006868 KH 220 249
ENSMODP00000006868 KH 265 317
ENSMODP00000037570 KH 206 235
ENSMODP00000037570 KH 251 364

Links

Other KH family RBPs
Other Monodelphis domestica RBPs

8 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
FMR1 Ornithorhynchus anatinus ENSOANG00000001097 I 0.753
FMR1 Homo sapiens ENSG00000102081 D 0.747
FMR1 Macaca mulatta ENSMMUG00000015814 I 0.747
LOC100414871 Callithrix jacchus ENSCJAG00000003925 I 0.747
FMR1 Pan troglodytes ENSPTRG00000022349 I 0.747
FMR1_RAT Rattus norvegicus ENSRNOG00000011900 I 0.747
Fmr1 Mus musculus ENSMUSG00000000838 I 0.747
ENSPPYG00000020797 Pongo pygmaeus ENSPPYG00000020797 I 0.741