ENSPPYG00000020797 (Pongo pygmaeus)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSPPYG00000020797 T19357_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
FMR1
M304_0.6 		Homo sapiens Sequence logo not available GGGCKAAGGARK SELEX
Cook et al.(2011)
471_15805463 		0.994
FMR1
M016_0.6 		Homo sapiens KGACARG RNAcompete
Ray et al.(2013)
RNCMPT00016 		0.994
FMR1
M305_0.6 		Homo sapiens Sequence logo not available KAGCGRCUGG SELEX
Cook et al.(2011)
471_15805463.1 		0.994
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSPPYP00000023279 KH 220 279
ENSPPYP00000023279 KH 283 396
ENSPPYP00000023280 KH 220 279
ENSPPYP00000023280 KH 283 349

Links

Other KH family RBPs
Other Pongo pygmaeus RBPs

33 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
FMR1 Homo sapiens ENSG00000102081 D 0.994
FMR1 Macaca mulatta ENSMMUG00000015814 I 0.994
FMR1 Pan troglodytes ENSPTRG00000022349 I 0.994
LOC100414871 Callithrix jacchus ENSCJAG00000003925 I 0.983
FMR1 Tursiops truncatus ENSTTRG00000000613 I 0.961
Fmr1 Mus musculus ENSMUSG00000000838 I 0.960
FMR1_RAT Rattus norvegicus ENSRNOG00000011900 I 0.943
FMR1 Cavia porcellus ENSCPOG00000003723 N 0.929
FMR1 Echinops telfairi ENSETEG00000006061 I 0.909
FMR1 Procavia capensis ENSPCAG00000011936 N 0.906
FMR1 Loxodonta africana ENSLAFG00000013592 N 0.906
FMR1 Spermophilus tridecemlineatus ENSSTOG00000003260 N 0.906
FMR1 Ornithorhynchus anatinus ENSOANG00000001097 I 0.902
FMR1 Sus scrofa ENSSSCG00000012727 I 0.899
FMR1 Felis catus ENSFCAG00000007228 I 0.898
FMR1 Gorilla gorilla ENSGGOG00000010373 N 0.898
Q0II33_BOVIN Bos taurus ENSBTAG00000012552 N 0.898
FMR1 Vicugna pacos ENSVPAG00000008700 I 0.892
FMR1 Oryctolagus cuniculus ENSOCUG00000014621 N 0.890
Ame_R006793 Ailuropoda melanoleuca Ame_R006793 I 0.885
FMR1 Pteropus vampyrus ENSPVAG00000013386 I 0.878
FMR1 Canis familiaris ENSCAFG00000019085 I 0.874
Fmr1 Dipodomys ordii ENSDORG00000012501 N 0.866
FMR1 Ochotona princeps ENSOPRG00000012759 N 0.866
FMR1 Anolis carolinensis ENSACAG00000007899 N 0.843
FMR1 Sorex araneus ENSSARG00000003475 N 0.843
FMR1 Dasypus novemcinctus ENSDNOG00000019486 I 0.842
FMR1 Meleagris gallopavo ENSMGAG00000008270 N 0.819
FMR1 Otolemur garnettii ENSOGAG00000013061 N 0.787
FMR1 Taeniopygia guttata ENSTGUG00000004735 I 0.747
FMR1 Monodelphis domestica ENSMODG00000005550 I 0.741
Q5ZHM3_CHICK Gallus gallus ENSGALG00000009177 I 0.713