CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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PCBP3
(
Sorex araneus
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
ENSSARG00000007629
T19472_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSARP00000006904
KH
1
44
KGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMI
ENSSARP00000006904
KH
68
130
TLRLVVPASQCGSIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQI
Links
Other
KH
family RBPs
Other
Sorex araneus
RBPs
13 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PCBP3
Tarsius syrichta
ENSTSYG00000005254
N
0.836
PCBP3
Spermophilus tridecemlineatus
ENSSTOG00000007178
N
0.826
pcbp1
Xenopus tropicalis
ENSXETG00000011483
N
0.822
ENSPPYG00000011525
Pongo pygmaeus
ENSPPYG00000011525
N
0.789
Pcbp3
Mus musculus
ENSMUSG00000001120
D
0.735
Pcbp3
Rattus norvegicus
ENSRNOG00000001245
I
0.735
PCBP3
Ornithorhynchus anatinus
ENSOANG00000006265
N
0.735
Pcbp3
Dipodomys ordii
ENSDORG00000003640
N
0.735
PCBP3
Canis familiaris
ENSCAFG00000011907
N
0.735
AAH74333
Xenopus laevis
AAH74333
N
0.735
AAI33216
Xenopus laevis
AAI33216
N
0.727
pcbp3
Danio rerio
ENSDARG00000054378
I
0.720
PCBP3
Takifugu rubripes
ENSTRUG00000013604
I
0.712