CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSPPYG00000011525
(
Pongo pygmaeus
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
ENSPPYG00000011525
T19341_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPPYP00000012865
KH
1
52
EVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMI
ENSPPYP00000012865
KH
76
139
TLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQI
Links
Other
KH
family RBPs
Other
Pongo pygmaeus
RBPs
24 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
pcbp1
Xenopus tropicalis
ENSXETG00000011483
N
0.948
PCBP3
Tarsius syrichta
ENSTSYG00000005254
N
0.931
Pcbp3
Rattus norvegicus
ENSRNOG00000001245
I
0.928
PCBP3
Canis familiaris
ENSCAFG00000011907
N
0.928
Pcbp3
Dipodomys ordii
ENSDORG00000003640
N
0.928
PCBP3
Ornithorhynchus anatinus
ENSOANG00000006265
N
0.928
Pcbp3
Mus musculus
ENSMUSG00000001120
D
0.928
AAH74333
Xenopus laevis
AAH74333
N
0.928
AAI33216
Xenopus laevis
AAI33216
N
0.920
PCBP3
Spermophilus tridecemlineatus
ENSSTOG00000007178
N
0.914
pcbp3
Danio rerio
ENSDARG00000054378
I
0.912
PCBP3
Takifugu rubripes
ENSTRUG00000013604
I
0.904
ENSMGAG00000003191
Meleagris gallopavo
ENSMGAG00000003191
N
0.844
PCBP2
Vicugna pacos
ENSVPAG00000000406
N
0.832
LOC426023
Gallus gallus
ENSGALG00000013313
N
0.832
PCBP2
Erinaceus europaeus
ENSEEUG00000001077
N
0.832
ENSTNIG00000003546
Tetraodon nigroviridis
ENSTNIG00000003546
N
0.828
zgc:110045
Danio rerio
ENSDARG00000057141
N
0.824
ENSTRUG00000017789
Takifugu rubripes
ENSTRUG00000017789
I
0.824
PCBP3
Sorex araneus
ENSSARG00000007629
N
0.789
PCBP4
Danio rerio
ENSDARG00000024276
N
0.784
PCBP4
Takifugu rubripes
ENSTRUG00000007426
I
0.760
PCBP4
Homo sapiens
ENSG00000090097
I
0.752
PHUM522820
Pediculus humanus
PHUM522820
N
0.752