CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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How to cite
pcbp2
(
Xenopus tropicalis
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
ENSXETG00000010491
T19757_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSXETP00000023019
KH
13
76
TLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQI
ENSXETP00000023019
KH
179
241
SHELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANASEGNGERQVTITGSPANISLAQYLI
Links
Other
KH
family RBPs
Other
Xenopus tropicalis
RBPs
6 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PCBP3
Loxodonta africana
ENSLAFG00000020835
I
0.953
PCBP2
Choloepus hoffmanni
ENSCHOG00000012759
N
0.882
PCBP2
Sorex araneus
ENSSARG00000000999
N
0.882
CAD13196
Xenopus laevis
CAD13196
N
0.882
ENSTRUG00000017789
Takifugu rubripes
ENSTRUG00000017789
I
0.811
PCBP4
Takifugu rubripes
ENSTRUG00000007426
I
0.780