CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
CAD13196
(
Xenopus laevis
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
CAD13196
T22152_0.6
Xenbase (2010-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CAD13196
KH
31
94
TLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQI
CAD13196
KH
175
237
SHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSNDRQVTITGSTASISLAQYLI
Links
Other
KH
family RBPs
Other
Xenopus laevis
RBPs
6 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PCBP2
Choloepus hoffmanni
ENSCHOG00000012759
N
0.984
PCBP2
Sorex araneus
ENSSARG00000000999
N
0.984
pcbp2
Xenopus tropicalis
ENSXETG00000010491
N
0.882
PCBP3
Loxodonta africana
ENSLAFG00000020835
I
0.874
ENSTRUG00000017789
Takifugu rubripes
ENSTRUG00000017789
I
0.772
PCBP4
Takifugu rubripes
ENSTRUG00000007426
I
0.764