CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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GLP15_4616
(
Giardia lamblia
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
GLP15_4616
T20393_0.6
EuPathDB (2010-Sep-21)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLP15_4616
KH
128
177
MSRAIGRIAGSGGKVKFTIENASKTRIVLADKTVHILGTVAGTRVARDAI
Links
Other
KH
family RBPs
Other
Giardia lamblia
RBPs
16 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
e_gw1.15.315.1
Tremella mesenterica
e_gw1.15.315.1
N
0.740
EFA79428.1
Polysphondylium pallidum
EFA79428.1
N
0.740
e_gw1.2.2126.1
Schizophyllum commune
e_gw1.2.2126.1
N
0.720
estExt_fgenesh1_pg.C_110137
Monosiga brevicollis
estExt_fgenesh1_pg.C_110137
N
0.720
RO3G_05288
Rhizopus oryzae
RO3G_05288
N
0.700
RO3G_00885
Rhizopus oryzae
RO3G_00885
N
0.700
PNO1
Tetraodon nigroviridis
ENSTNIG00000009825
N
0.700
PNO1
Takifugu rubripes
ENSTRUG00000012470
N
0.700
CNBG_1323
Cryptococcus neoformans
CNBG_1323
N
0.700
pno1
Dictyostelium discoideum
DDB_G0287557
N
0.700
e_gw1.8.261.1
Sporobolomyces roseus
e_gw1.8.261.1
N
0.700
fgenesh3_pm.54__15
Postia placenta
fgenesh3_pm.54__15
N
0.700
fgeneshTA2_pg.C_scaffold_14000176
Trichoplax adhaerens
fgeneshTA2_pg.C_scaffold_14000176
N
0.700
GID1.0042265
Dictyostelium purpureum
GID1.0042265
N
0.700
e_gww2.1.865.1
Phanerochaete chrysosporium
e_gww2.1.865.1
N
0.700
e_gw1.2.756.1
Heterobasidion annosum
e_gw1.2.756.1
N
0.700