EFA79428.1 (Polysphondylium pallidum)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 EFA79428.1 T21402_0.6 NCBI (2013-Jan-11)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
EFA79428.1 KH 167 215

Links

Other KH family RBPs
Other Polysphondylium pallidum RBPs

190 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
pno1 Dictyostelium discoideum DDB_G0287557 N 0.939
GID1.0042265 Dictyostelium purpureum GID1.0042265 N 0.939
e_gw1.2.2126.1 Schizophyllum commune e_gw1.2.2126.1 N 0.820
estExt_fgenesh1_pg.C_110137 Monosiga brevicollis estExt_fgenesh1_pg.C_110137 N 0.800
Chlre2_kg.scaffold_20000177 Chlamydomonas reinhardtii Chlre2_kg.scaffold_20000177 N 0.800
estExt_Genewise1Plus.C_600117 Volvox carteri estExt_Genewise1Plus.C_600117 N 0.800
fgeneshTA2_pg.C_scaffold_14000176 Trichoplax adhaerens fgeneshTA2_pg.C_scaffold_14000176 N 0.800
XP_798188.2 Strongylocentrotus purpuratus XP_798188.2 N 0.780
XP_791733.2 Strongylocentrotus purpuratus XP_791733.2 N 0.780
XP_001202160.1 Strongylocentrotus purpuratus XP_001202160.1 N 0.780
XP_001202155.1 Strongylocentrotus purpuratus XP_001202155.1 N 0.780
AMAG_12889 Allomyces macrogynus AMAG_12889 N 0.780
AMAG_14219 Allomyces macrogynus AMAG_14219 N 0.780
Genemark1.5719_g Coccomyxa C 169 Genemark1.5719_g N 0.780
Q6VBQ6_ORYLA Oryzias latipes ENSORLG00000002371 N 0.780
estExt_Genewise1.C_260084 Melampsora laricis populina estExt_Genewise1.C_260084 N 0.780
e_gwh1.2.512.1 Laccaria bicolor e_gwh1.2.512.1 N 0.780
pno1 Danio rerio ENSDARG00000008502 N 0.780
fgeneshCV_pg.C_scaffold_11000142 Chlorella vulgaris fgeneshCV_pg.C_scaffold_11000142 N 0.780
estExt_fgenesh2_kg.C_20130 Agaricus bisporus estExt_fgenesh2_kg.C_20130 N 0.780
SPPG_04498 Spizellomyces punctatus SPPG_04498 N 0.776
PNO1 Tetraodon nigroviridis ENSTNIG00000009825 N 0.760
PNO1 Taeniopygia guttata ENSTGUG00000002369 N 0.760
PNO1 Takifugu rubripes ENSTRUG00000012470 N 0.760
AAQ24169 Xenopus laevis AAQ24169 N 0.760
DGIL_AUG5s4501g8t1 Acyrtosiphon pisum DGIL_AUG5s4501g8t1 N 0.760
Bm1_42995 Brugia malayi Bm1_42995 N 0.760
pno1 Xenopus tropicalis ENSXETG00000017349 N 0.760
PNO1_CHICK Gallus gallus ENSGALG00000009093 N 0.760
RO3G_00885 Rhizopus oryzae RO3G_00885 N 0.760
RO3G_05288 Rhizopus oryzae RO3G_05288 N 0.760
SJAG_03872 Schizosaccharomyces japonicus SJAG_03872 N 0.760
PNO1 Meleagris gallopavo ENSMGAG00000004514 N 0.760
LOAG_05624 Loa loa LOAG_05624 N 0.760
AAH42279 Xenopus laevis AAH42279 N 0.760
WUBG_12774 Wuchereria bancrofti WUBG_12774 N 0.760
ENSCING00000009577 Ciona intestinalis ENSCING00000009577 N 0.760
Q8AVH4 Xenopus laevis Q8AVH4 N 0.760
BGIBMGA014064 Bombyx mori BGIBMGA014064 N 0.760
EDI_198550 Entamoeba dispar EDI_198550 N 0.760
e_gww2.1.865.1 Phanerochaete chrysosporium e_gww2.1.865.1 N 0.760
ENSCSAVG00000001303 Ciona savignyi ENSCSAVG00000001303 N 0.760
EHI_065870 Entamoeba histolytica EHI_065870 N 0.760
fgenesh1_pg.C_scaffold_107000027 Daphnia pulex fgenesh1_pg.C_scaffold_107000027 N 0.760
fgenesh3_pm.54__15 Postia placenta fgenesh3_pm.54__15 N 0.760
fgenesh2_pm.scaffold_78000001 Branchiostoma floridae fgenesh2_pm.scaffold_78000001 N 0.760
XP_002162789.1 Hydra magnipapillata XP_002162789.1 N 0.760
fgenesh2_pg.scaffold_196000015 Branchiostoma floridae fgenesh2_pg.scaffold_196000015 N 0.760
estExt_Genewise1Plus.C_250095 Phycomyces blakesleeanus estExt_Genewise1Plus.C_250095 N 0.755
e_gw1.13.100.1 Volvox carteri e_gw1.13.100.1 N 0.755
GA11169-RA Drosophila pseudoobscura FBgn0071224 N 0.745
GH12628 Drosophila grimshawi FBgn0120107 N 0.745
GK20148 Drosophila willistoni FBgn0222145 N 0.745
GJ15820 Drosophila virilis FBgn0203007 N 0.745
GI11042 Drosophila mojavensis FBgn0133805 N 0.745
PNO1 Microcebus murinus ENSMICG00000010897 N 0.740
Q7YRC8_MACMU Macaca mulatta ENSMMUG00000017461 N 0.740
PNO1 Myotis lucifugus ENSMLUG00000010850 N 0.740
LOC100389955 Callithrix jacchus ENSCJAG00000006564 N 0.740
PNO1 Gorilla gorilla ENSGGOG00000009158 N 0.740
PNO1 Gasterosteus aculeatus ENSGACG00000012047 N 0.740
PNO1 Cavia porcellus ENSCPOG00000010130 N 0.740
PNO1 Homo sapiens ENSG00000115946 N 0.740
PNO1 Erinaceus europaeus ENSEEUG00000009611 N 0.740
ENSCJAG00000022611 Callithrix jacchus ENSCJAG00000022611 N 0.740
Pno1 Dipodomys ordii ENSDORG00000006867 N 0.740
LOC100061904 Equus caballus ENSECAG00000011263 N 0.740
PNO1 Loxodonta africana ENSLAFG00000000046 N 0.740
Pno1 Rattus norvegicus ENSRNOG00000005524 N 0.740
PHATRDRAFT_9929 Phaeodactylum tricornutum Phatr9929 N 0.740
PNO1 Vicugna pacos ENSVPAG00000012083 N 0.740
PNO1 Tursiops truncatus ENSTTRG00000014002 N 0.740
PNO1 Sus scrofa ENSSSCG00000008352 N 0.740
GLP15_4616 Giardia lamblia GLP15_4616 N 0.740
Ame_R013855 Ailuropoda melanoleuca Ame_R013855 N 0.740
fgenesh1_pg.scaffold_18000119 Nematostella vectensis fgenesh1_pg.scaffold_18000119 N 0.740
estExt_Genewise1Plus.C_10658 Mucor circinelloides estExt_Genewise1Plus.C_10658 N 0.740
e_gw1.226.39.1 Physcomitrella patens e_gw1.226.39.1 N 0.740
PNO1 Pteropus vampyrus ENSPVAG00000012695 N 0.740
PNO1 Pan troglodytes ENSPTRG00000011999 N 0.740
PNO1 Ornithorhynchus anatinus ENSOANG00000008388 N 0.740
Pno1 Mus musculus ENSMUSG00000020116 N 0.740
PNO1 Monodelphis domestica ENSMODG00000003567 N 0.740
ENSOCUG00000006100 Oryctolagus cuniculus ENSOCUG00000006100 N 0.740
ENSOCUG00000022236 Oryctolagus cuniculus ENSOCUG00000022236 N 0.740
ENSPPYG00000012353 Pongo pygmaeus ENSPPYG00000012353 N 0.740
PNO1 Procavia capensis ENSPCAG00000016146 N 0.740
PNO1 Ochotona princeps ENSOPRG00000009643 N 0.740
XM_001095777.1 Macaca mulatta ENSMMUG00000030357 N 0.740
PNO1 Macropus eugenii ENSMEUG00000004504 N 0.740
e_gw1.12.287.1 Serpula lacrymans e_gw1.12.287.1 N 0.740
EDP42908.1 Malassezia globosa EDP42908.1 N 0.740
PTTG_01898 Puccinia triticina PTTG_01898 N 0.740
PNO1 Canis familiaris ENSCAFG00000003256 N 0.740
gw1.1.2472.1 Pleurotus ostreatus gw1.1.2472.1 N 0.740
GSPATP00020703001 Paramecium tetraurelia GSPATP00020703001 N 0.740
GSPATP00021981001 Paramecium tetraurelia GSPATP00021981001 N 0.740
amel4_ncbi_hmm14037 Apis mellifera amel4_ncbi_hmm14037 N 0.740
e_gw1.2.756.1 Heterobasidion annosum e_gw1.2.756.1 N 0.740
PNO1 Anolis carolinensis ENSACAG00000001218 N 0.740
PNO1_BOVIN Bos taurus ENSBTAG00000010604 N 0.740
PPA25260 Pristionchus pacificus PPA25260 N 0.735
GSTUMT00003923001 Tuber melanosporum GSTUMT00003923001 N 0.735
GP3.070330 Batrachochytrium dendrobatidis GP3.070330 N 0.735
e_gw1.18.222.1 Chlorella NC64A e_gw1.18.222.1 N 0.735
GE17874 Drosophila yakuba FBgn0068478 N 0.725
GM23025 Drosophila sechellia FBgn0177893 N 0.725
GG19285 Drosophila erecta FBgn0111489 N 0.725
l(1)G0004 Drosophila melanogaster FBgn0027334 N 0.725
GF20246 Drosophila ananassae FBgn0097253 N 0.725
GD17488 Drosophila simulans FBgn0189040 N 0.725
rbp28 Schizosaccharomyces pombe SPAC2C4.11c N 0.720
ZYRO0D11440g Zygosaccharomyces rouxii ZYRO0D11440g N 0.720
SAKL0G03740g Lachancea kluyveri SAKL0G03740g N 0.720
PHUM356890 Pediculus humanus PHUM356890 N 0.720
nasonia_NCBI_hmm120183 Nasonia vitripennis nasonia_NCBI_hmm120183 N 0.720
ppa009897m Prunus persica ppa009897m N 0.720
e_gwEuk.7.409.1 Ostreococcus lucimarinus e_gwEuk.7.409.1 N 0.720
e_gw1.7.528.1 Ostreococcus RCC809 e_gw1.7.528.1 N 0.720
MDP0000136407 Malus x domestica MDP0000136407 N 0.720
MDP0000120063 Malus x domestica MDP0000120063 N 0.720
estExt_Genewise1.C_10689 Thielavia terrestris estExt_Genewise1.C_10689 N 0.720
estExt_genewise1_human.C_chr_1.20929 Pichia stipitis estExt_genewise1_human.C_chr_1.20929 N 0.720
MDP0000265633 Malus x domestica MDP0000265633 N 0.720
A7THL8_VANPO Vanderwaltozyma polyspora A7THL8_VANPO N 0.720
fgenesh1_pm.C_scaffold_5000030 Phytophthora ramorum fgenesh1_pm.C_scaffold_5000030 N 0.720
CPIJ015853 Culex quinquefasciatus CPIJ015853 N 0.720
Cd36_35296 Candida dubliniensis Cd36_35296 N 0.720
fgenesh1_kg.C_scaffold_5000048 Selaginella moellendorfii fgenesh1_kg.C_scaffold_5000048 N 0.720
MDP0000754021 Malus x domestica MDP0000754021 N 0.720
ppa011086m Prunus persica ppa011086m N 0.720
CPIJ019677 Culex quinquefasciatus CPIJ019677 N 0.720
PITG_01680 Phytophthora infestans PITG_01680 N 0.720
Scas_Contig632.19 Saccharomyces castellii Scas_Contig632.19 N 0.720
CAGL0K09460g Candida glabrata CAGL0K09460g N 0.720
LELG_05249 Lodderomyces elongisporus LELG_05249 N 0.720
PTSG_04415 Salpingoeca rosetta PTSG_04415 N 0.720
SOCG_04140 Schizosaccharomyces octosporus SOCG_04140 N 0.720
PK08146.1 Cannabis sativa PK08146.1 N 0.720
SPOG_00402 Schizosaccharomyces cryophilus SPOG_00402 N 0.720
s_468317 Phytophthora sojae s_468317 N 0.720
DEHA0G05258g Debaryomyces hansenii DEHA0G05258g N 0.720
orf19.7618 Candida albicans orf19.7618 N 0.720
CpipJ_CPIJ015853 Culex pipiens CpipJ_CPIJ015853 N 0.720
CLUG_01545 Candida lusitaniae CLUG_01545 N 0.720
CPAG_01545 Candida parapsilosis CPAG_01545 N 0.720
CpipJ_CPIJ019677 Culex pipiens CpipJ_CPIJ019677 N 0.720
CTRG_05813 Candida tropicalis CTRG_05813 N 0.720
TRV_03730 Trichophyton verrucosum TRV_03730 N 0.714
SNOG_03777 Stagonospora nodorum SNOG_03777 N 0.714
TESG_04215 Trichophyton tonsurans TESG_04215 N 0.714
TEQG_07954 Trichophyton equinum TEQG_07954 N 0.714
TERG_01665 Trichophyton rubrum TERG_01665 N 0.714
EAT88982.1 Phaeosphaeria nodorum EAT88982.1 N 0.714
CIMG_07268 Coccidioides immitis CIMG_07268 N 0.714
MCYG_07269 Microsporum canis MCYG_07269 N 0.714
CPSG_08784 Coccidioides posadasii CPSG_08784 N 0.714
HCAG_04100 Histoplasma capsulatum HCAG_04100 N 0.714
PNO1_IXOSC Ixodes scapularis ISCW023560 N 0.714
MGYG_04767 Microsporum gypseum MGYG_04767 N 0.714
194870 Helobdella robusta 194870 N 0.714
ARB_00984 Arthroderma benhamiae ARB_00984 N 0.714
estExt_Genewise1Plus.C_10659 Myceliophthora thermophila estExt_Genewise1Plus.C_10659 N 0.700
estExt_Genewise1.C_5820041 Capitella teleta estExt_Genewise1.C_5820041 N 0.700
KLTH0G02574g Kluyveromyces thermotolerans KLTH0G02574g N 0.700
Skud_Contig1833.8 Saccharomyces kudriavzevii Skud_Contig1833.8 N 0.700
KLLA0C06446g Kluyveromyces lactis KLLA0C06446g N 0.700
fgenesh2_pm.11_#_145 Fragilariopsis cylindrus fgenesh2_pm.11_#_145 N 0.700
0700010277 Ostreococcus tauri 0700010277 N 0.700
Kwal_18864 Kluyveromyces waltii Kwal_18864 N 0.700
B9N5M8_POPTR Populus trichocarpa POPTR_0011s16880 N 0.700
Medtr3g080390 Medicago truncatula Medtr3g080390 N 0.700
estExt_fgenesh1_pg.C_190237 Phytophthora capsici estExt_fgenesh1_pg.C_190237 N 0.700
B9GHH7_POPTR Populus trichocarpa POPTR_0001s47320 N 0.700
e_gw1.15.315.1 Tremella mesenterica e_gw1.15.315.1 N 0.700
PGUG_02960 Candida guilliermondii PGUG_02960 N 0.700
SPRG_02415 Saprolegnia parasitica SPRG_02415 N 0.700
XM_001110046.1 Macaca mulatta ENSMMUG00000003556 N 0.700
CJA15618 Caenorhabditis japonica CJA15618 N 0.700
PNO1 Saccharomyces cerevisiae YOR145C N 0.700
27316 Aureococcus anophagefferens 27316 N 0.700
23888_YOR145C Saccharomyces bayanus 23888_YOR145C N 0.700
estExt_fgenesh1_kg.C_140013 Cochliobolus heterostrophus C5 estExt_fgenesh1_kg.C_140013 N 0.700
20872_YOR145C Saccharomyces paradoxus 20872_YOR145C N 0.700
e_gw1.8.261.1 Sporobolomyces roseus e_gw1.8.261.1 N 0.700
Cucsa.201760 Cucumis sativus Cucsa.201760 N 0.700
28525.m000262 Ricinus communis 28525.m000262 N 0.700
PNO1 Ashbya gossypii PNO1 N 0.700
Cucsa.041830 Cucumis sativus Cucsa.041830 N 0.700
estExt_fgeneshHS_pm.C_280002 Naegleria gruberi estExt_fgeneshHS_pm.C_280002 N 0.700