RO3G_05288 (Rhizopus oryzae)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 RO3G_05288 T17800_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
RO3T_05287 KH 126 175

Links

Other KH family RBPs
Other Rhizopus oryzae RBPs

236 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
RO3G_00885 Rhizopus oryzae RO3G_00885 N 1.000
estExt_Genewise1Plus.C_10658 Mucor circinelloides estExt_Genewise1Plus.C_10658 N 0.980
fgenesh3_pm.54__15 Postia placenta fgenesh3_pm.54__15 N 0.940
e_gww2.1.865.1 Phanerochaete chrysosporium e_gww2.1.865.1 N 0.940
gw1.1.2472.1 Pleurotus ostreatus gw1.1.2472.1 N 0.920
e_gw1.12.287.1 Serpula lacrymans e_gw1.12.287.1 N 0.920
estExt_Genewise1Plus.C_250095 Phycomyces blakesleeanus estExt_Genewise1Plus.C_250095 N 0.920
e_gw1.2.756.1 Heterobasidion annosum e_gw1.2.756.1 N 0.900
estExt_fgenesh2_kg.C_20130 Agaricus bisporus estExt_fgenesh2_kg.C_20130 N 0.880
XP_001202160.1 Strongylocentrotus purpuratus XP_001202160.1 N 0.880
e_gw1.2.2126.1 Schizophyllum commune e_gw1.2.2126.1 N 0.880
XP_001202155.1 Strongylocentrotus purpuratus XP_001202155.1 N 0.880
e_gwh1.2.512.1 Laccaria bicolor e_gwh1.2.512.1 N 0.880
e_gw1.15.315.1 Tremella mesenterica e_gw1.15.315.1 N 0.880
XP_791733.2 Strongylocentrotus purpuratus XP_791733.2 N 0.880
XP_798188.2 Strongylocentrotus purpuratus XP_798188.2 N 0.880
AMAG_12889 Allomyces macrogynus AMAG_12889 N 0.860
AMAG_14219 Allomyces macrogynus AMAG_14219 N 0.860
PTTG_01898 Puccinia triticina PTTG_01898 N 0.860
Q6VBQ6_ORYLA Oryzias latipes ENSORLG00000002371 N 0.860
pno1 Danio rerio ENSDARG00000008502 N 0.860
fgenesh2_pg.scaffold_196000015 Branchiostoma floridae fgenesh2_pg.scaffold_196000015 N 0.840
PNO1 Taeniopygia guttata ENSTGUG00000002369 N 0.840
fgenesh2_pm.scaffold_78000001 Branchiostoma floridae fgenesh2_pm.scaffold_78000001 N 0.840
Medtr3g080390 Medicago truncatula Medtr3g080390 N 0.840
PNO1 Tetraodon nigroviridis ENSTNIG00000009825 N 0.840
XP_002162789.1 Hydra magnipapillata XP_002162789.1 N 0.840
PNO1 Takifugu rubripes ENSTRUG00000012470 N 0.840
fgenesh1_pg.scaffold_18000119 Nematostella vectensis fgenesh1_pg.scaffold_18000119 N 0.840
PNO1 Meleagris gallopavo ENSMGAG00000004514 N 0.820
pno1 Xenopus tropicalis ENSXETG00000017349 N 0.820
GP3.070330 Batrachochytrium dendrobatidis GP3.070330 N 0.820
AAQ24169 Xenopus laevis AAQ24169 N 0.820
PNO1_CHICK Gallus gallus ENSGALG00000009093 N 0.820
AAH42279 Xenopus laevis AAH42279 N 0.820
PNO1 Gasterosteus aculeatus ENSGACG00000012047 N 0.820
Q8AVH4 Xenopus laevis Q8AVH4 N 0.820
Glyma18g08080.1 Glycine max Glyma18g08080.1 N 0.820
rbp28 Schizosaccharomyces pombe SPAC2C4.11c N 0.820
estExt_Genewise1Plus.C_600117 Volvox carteri estExt_Genewise1Plus.C_600117 N 0.820
Glyma08g44800.1 Glycine max Glyma08g44800.1 N 0.820
Chlre2_kg.scaffold_20000177 Chlamydomonas reinhardtii Chlre2_kg.scaffold_20000177 N 0.820
CNBG_1323 Cryptococcus neoformans CNBG_1323 N 0.820
estExt_Genewise1.C_260084 Melampsora laricis populina estExt_Genewise1.C_260084 N 0.820
cassava30594.valid.m1 Manihot esculenta cassava30594.valid.m1 N 0.820
Glyma18g08100.1 Glycine max Glyma18g08100.1 N 0.820
cassava7030.valid.m1 Manihot esculenta cassava7030.valid.m1 N 0.800
PNO1 Pan troglodytes ENSPTRG00000011999 N 0.800
PNO1 Pteropus vampyrus ENSPVAG00000012695 N 0.800
Pno1 Rattus norvegicus ENSRNOG00000005524 N 0.800
PNO1 Sus scrofa ENSSSCG00000008352 N 0.800
PNO1 Tursiops truncatus ENSTTRG00000014002 N 0.800
estExt_fgenesh1_kg.C_140013 Cochliobolus heterostrophus C5 estExt_fgenesh1_kg.C_140013 N 0.800
B9N5M8_POPTR Populus trichocarpa POPTR_0011s16880 N 0.800
B9GHH7_POPTR Populus trichocarpa POPTR_0001s47320 N 0.800
ENSPPYG00000012353 Pongo pygmaeus ENSPPYG00000012353 N 0.800
LjSGA_017760.2 Lotus japonicus LjSGA_017760.2 N 0.800
Cucsa.201760 Cucumis sativus Cucsa.201760 N 0.800
Cucsa.041830 Cucumis sativus Cucsa.041830 N 0.800
e_gw1.8.261.1 Sporobolomyces roseus e_gw1.8.261.1 N 0.800
PNO1 Vicugna pacos ENSVPAG00000012083 N 0.800
PNO1 Microcebus murinus ENSMICG00000010897 N 0.800
LOC100389955 Callithrix jacchus ENSCJAG00000006564 N 0.800
PNO1 Canis familiaris ENSCAFG00000003256 N 0.800
PNO1 Cavia porcellus ENSCPOG00000010130 N 0.800
PNO1 Procavia capensis ENSPCAG00000016146 N 0.800
PNO1 Erinaceus europaeus ENSEEUG00000009611 N 0.800
LOC100061904 Equus caballus ENSECAG00000011263 N 0.800
PNO1_BOVIN Bos taurus ENSBTAG00000010604 N 0.800
PNO1 Anolis carolinensis ENSACAG00000001218 N 0.800
UM03495 Ustilago maydis UM03495 N 0.800
fgeneshTA2_pg.C_scaffold_14000176 Trichoplax adhaerens fgeneshTA2_pg.C_scaffold_14000176 N 0.800
Scas_Contig632.19 Saccharomyces castellii Scas_Contig632.19 N 0.800
estExt_Genewise1.C_5820041 Capitella teleta estExt_Genewise1.C_5820041 N 0.800
Ame_R013855 Ailuropoda melanoleuca Ame_R013855 N 0.800
PNO1 Homo sapiens ENSG00000115946 N 0.800
Pno1 Dipodomys ordii ENSDORG00000006867 N 0.800
ENSOCUG00000022236 Oryctolagus cuniculus ENSOCUG00000022236 N 0.800
PNO1 Monodelphis domestica ENSMODG00000003567 N 0.800
PNO1 Gorilla gorilla ENSGGOG00000009158 N 0.800
ENSOCUG00000006100 Oryctolagus cuniculus ENSOCUG00000006100 N 0.800
PNO1 Ornithorhynchus anatinus ENSOANG00000008388 N 0.800
XM_001095777.1 Macaca mulatta ENSMMUG00000030357 N 0.800
PNO1 Ochotona princeps ENSOPRG00000009643 N 0.800
PNO1 Loxodonta africana ENSLAFG00000000046 N 0.800
PNO1 Macropus eugenii ENSMEUG00000004504 N 0.800
28525.m000262 Ricinus communis 28525.m000262 N 0.800
Q7YRC8_MACMU Macaca mulatta ENSMMUG00000017461 N 0.800
PNO1 Myotis lucifugus ENSMLUG00000010850 N 0.800
fgenesh1_pm.C_scaffold_5000030 Phytophthora ramorum fgenesh1_pm.C_scaffold_5000030 N 0.780
estExt_Genewise1Plus.C_chr_70397 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_70397 N 0.780
estExt_genewise1_human.C_chr_1.20929 Pichia stipitis estExt_genewise1_human.C_chr_1.20929 N 0.780
CAGL0K09460g Candida glabrata CAGL0K09460g N 0.780
e_gw1.3.1059.1 Mycosphaerella fijiensis e_gw1.3.1059.1 N 0.780
Cd36_35296 Candida dubliniensis Cd36_35296 N 0.780
SJAG_03872 Schizosaccharomyces japonicus SJAG_03872 N 0.780
fgeneshCV_pg.C_scaffold_11000142 Chlorella vulgaris fgeneshCV_pg.C_scaffold_11000142 N 0.780
A7THL8_VANPO Vanderwaltozyma polyspora A7THL8_VANPO N 0.780
YALI0E01122g Yarrowia lipolytica YALI0E01122g N 0.780
DEHA0G05258g Debaryomyces hansenii DEHA0G05258g N 0.780
nasonia_NCBI_hmm120183 Nasonia vitripennis nasonia_NCBI_hmm120183 N 0.780
DGIL_AUG5s4501g8t1 Acyrtosiphon pisum DGIL_AUG5s4501g8t1 N 0.780
CTRG_05813 Candida tropicalis CTRG_05813 N 0.780
Genemark1.5719_g Coccomyxa C 169 Genemark1.5719_g N 0.780
Pno1 Mus musculus ENSMUSG00000020116 N 0.780
CLUG_01545 Candida lusitaniae CLUG_01545 N 0.780
amel4_ncbi_hmm14037 Apis mellifera amel4_ncbi_hmm14037 N 0.780
PK08146.1 Cannabis sativa PK08146.1 N 0.780
SPOG_00402 Schizosaccharomyces cryophilus SPOG_00402 N 0.780
SOCG_04140 Schizosaccharomyces octosporus SOCG_04140 N 0.780
SPRG_02415 Saprolegnia parasitica SPRG_02415 N 0.780
PITG_01680 Phytophthora infestans PITG_01680 N 0.780
LELG_05249 Lodderomyces elongisporus LELG_05249 N 0.780
orf19.7618 Candida albicans orf19.7618 N 0.780
ZYRO0D11440g Zygosaccharomyces rouxii ZYRO0D11440g N 0.780
CPAG_01545 Candida parapsilosis CPAG_01545 N 0.780
s_468317 Phytophthora sojae s_468317 N 0.780
ppa009897m Prunus persica ppa009897m N 0.780
MDP0000265633 Malus x domestica MDP0000265633 N 0.780
MDP0000136407 Malus x domestica MDP0000136407 N 0.780
MDP0000120063 Malus x domestica MDP0000120063 N 0.780
ppa011086m Prunus persica ppa011086m N 0.780
MDP0000754021 Malus x domestica MDP0000754021 N 0.780
SAKL0G03740g Lachancea kluyveri SAKL0G03740g N 0.780
LOAG_05624 Loa loa LOAG_05624 N 0.760
BC1G_12211 Botrytis cinerea BC1G_12211 N 0.760
FVEG_01480 Fusarium verticillioides FVEG_01480 N 0.760
FOXG_00036 Fusarium oxysporum FOXG_00036 N 0.760
PGUG_02960 Candida guilliermondii PGUG_02960 N 0.760
EFA79428.1 Polysphondylium pallidum EFA79428.1 N 0.760
GSTUMT00003923001 Tuber melanosporum GSTUMT00003923001 N 0.760
KLLA0C06446g Kluyveromyces lactis KLLA0C06446g N 0.760
KLTH0G02574g Kluyveromyces thermotolerans KLTH0G02574g N 0.760
Kwal_18864 Kluyveromyces waltii Kwal_18864 N 0.760
Bm1_42995 Brugia malayi Bm1_42995 N 0.760
estExt_fgenesh1_pg.C_190237 Phytophthora capsici estExt_fgenesh1_pg.C_190237 N 0.760
FGSG_01345 Fusarium graminearum FGSG_01345 N 0.760
3712.m00082 Tetrahymena thermophila 3712.m00082 N 0.760
PNO1 Ashbya gossypii PNO1 N 0.760
EDP42908.1 Malassezia globosa EDP42908.1 N 0.760
23888_YOR145C Saccharomyces bayanus 23888_YOR145C N 0.760
Pc14g01220 Penicillium chrysogenum Pc14g01220 N 0.760
Skud_Contig1833.8 Saccharomyces kudriavzevii Skud_Contig1833.8 N 0.760
BGIBMGA014064 Bombyx mori BGIBMGA014064 N 0.760
CIMG_07268 Coccidioides immitis CIMG_07268 N 0.760
20872_YOR145C Saccharomyces paradoxus 20872_YOR145C N 0.760
CPSG_08784 Coccidioides posadasii CPSG_08784 N 0.760
estExt_fgenesh1_pg.C_110137 Monosiga brevicollis estExt_fgenesh1_pg.C_110137 N 0.760
e_gw1.4.614.1 Micromonas pusilla e_gw1.4.614.1 N 0.760
e_gw1.18.222.1 Chlorella NC64A e_gw1.18.222.1 N 0.760
estExt_fgenesh1_pg.C_sca_1_chr1_3_00036 Nectria haematococca estExt_fgenesh1_pg.C_sca_1_chr1_3_00036 N 0.760
PNO1 Saccharomyces cerevisiae YOR145C N 0.760
estExt_fgenesh5_pg.C_40050 Trichoderma reesei estExt_fgenesh5_pg.C_40050 N 0.760
estExt_Genewise1Plus.C_91132 Trichoderma virens estExt_Genewise1Plus.C_91132 N 0.760
fgenesh1_pm.C_scaffold_14000035 Trichoderma atroviride fgenesh1_pm.C_scaffold_14000035 N 0.760
XM_001110046.1 Macaca mulatta ENSMMUG00000003556 N 0.760
WUBG_12774 Wuchereria bancrofti WUBG_12774 N 0.760
SS1G_04290 Sclerotinia sclerotiorum SS1G_04290 N 0.760
ENSCING00000009577 Ciona intestinalis ENSCING00000009577 N 0.760
ENSCJAG00000022611 Callithrix jacchus ENSCJAG00000022611 N 0.760
ENSCSAVG00000001303 Ciona savignyi ENSCSAVG00000001303 N 0.760
PHUM356890 Pediculus humanus PHUM356890 N 0.760
GE17874 Drosophila yakuba FBgn0068478 N 0.745
l(1)G0004 Drosophila melanogaster FBgn0027334 N 0.745
GF20246 Drosophila ananassae FBgn0097253 N 0.745
GG19285 Drosophila erecta FBgn0111489 N 0.745
GM23025 Drosophila sechellia FBgn0177893 N 0.745
GD17488 Drosophila simulans FBgn0189040 N 0.745
GK20148 Drosophila willistoni FBgn0222145 N 0.745
20359_YOR145C Saccharomyces mikatae 20359_YOR145C N 0.745
pno1 Dictyostelium discoideum DDB_G0287557 N 0.740
ARB_00984 Arthroderma benhamiae ARB_00984 N 0.740
BDBG_01721 Blastomyces dermatitidis BDBG_01721 N 0.740
EAT88982.1 Phaeosphaeria nodorum EAT88982.1 N 0.740
e_gw1.7.528.1 Ostreococcus RCC809 e_gw1.7.528.1 N 0.740
0700010277 Ostreococcus tauri 0700010277 N 0.740
fgenesh1_pg.C_scaffold_107000027 Daphnia pulex fgenesh1_pg.C_scaffold_107000027 N 0.740
UREG_07832 Uncinocarpus reesii UREG_07832 N 0.740
GID1.0042265 Dictyostelium purpureum GID1.0042265 N 0.740
HCAG_04100 Histoplasma capsulatum HCAG_04100 N 0.740
TEQG_07954 Trichophyton equinum TEQG_07954 N 0.740
PTRG_02803 Pyrenophora tritici repentis PTRG_02803 N 0.740
SPPG_04498 Spizellomyces punctatus SPPG_04498 N 0.740
SNOG_03777 Stagonospora nodorum SNOG_03777 N 0.740
TERG_01665 Trichophyton rubrum TERG_01665 N 0.740
MGYG_04767 Microsporum gypseum MGYG_04767 N 0.740
TRV_03730 Trichophyton verrucosum TRV_03730 N 0.740
TESG_04215 Trichophyton tonsurans TESG_04215 N 0.740
MCYG_07269 Microsporum canis MCYG_07269 N 0.740
estExt_Genewise1Plus.C_10659 Myceliophthora thermophila estExt_Genewise1Plus.C_10659 N 0.740
Medtr5g095530 Medicago truncatula Medtr5g095530 N 0.740
e_gwEuk.7.409.1 Ostreococcus lucimarinus e_gwEuk.7.409.1 N 0.740
GSPATP00021981001 Paramecium tetraurelia GSPATP00021981001 N 0.740
e_gw1.13.100.1 Volvox carteri e_gw1.13.100.1 N 0.740
estExt_fgenesh2_pm.C_sca_70005 Lottia gigantea estExt_fgenesh2_pm.C_sca_70005 N 0.740
e_gw1.3.2749.1 Cryphonectria parasitica e_gw1.3.2749.1 N 0.740
GSPATP00020703001 Paramecium tetraurelia GSPATP00020703001 N 0.740
GA11169-RA Drosophila pseudoobscura FBgn0071224 N 0.725
GH12628 Drosophila grimshawi FBgn0120107 N 0.725
GJ15820 Drosophila virilis FBgn0203007 N 0.725
BRADI2G52180 Brachypodium distachyon BRADI2G52180 N 0.720
BGIOSIBCE009391 Oryza indica BGIOSIBCE009391 N 0.720
mgf006621m Mimulus guttatus mgf006621m N 0.720
GRMZM2G139198 Zea mays GRMZM2G139198 N 0.720
ANIA_05785 Aspergillus nidulans CADANIAG00003265 N 0.720
27316 Aureococcus anophagefferens 27316 N 0.720
GRMZM2G085005 Zea mays GRMZM2G085005 N 0.720
PABG_01374 Paracoccidioides brasiliensis PABG_01374 N 0.720
CBN06104 Caenorhabditis brenneri CBN06104 N 0.720
EHI_065870 Entamoeba histolytica EHI_065870 N 0.720
EDI_198550 Entamoeba dispar EDI_198550 N 0.720
CBG01042 Caenorhabditis briggsae CBG01042 N 0.720
estExt_Genewise1.C_10689 Thielavia terrestris estExt_Genewise1.C_10689 N 0.720
LOC_Os03g02420 Oryza sativa LOC_Os03g02420 N 0.720
LOC_Os01g57910 Oryza sativa LOC_Os01g57910 N 0.720
PDK_20s1554761g001 Phoenix dactylifera PDK_20s1554761g001 N 0.720
SB03G036840 Sorghum bicolor Sb03g036840 N 0.720
fgenesh_newKGs_pm.139__21 Emiliania huxleyi fgenesh_newKGs_pm.139__21 N 0.720
CRE05188 Caenorhabditis remanei CRE05188 N 0.720
AMSG_02733 Thecamonas trahens AMSG_02733 N 0.720
Y53C12B.2 Caenorhabditis elegans Y53C12B.2 N 0.720
GLRG_03940 Colletotrichum graminicola GLRG_03940 N 0.712
GI11042 Drosophila mojavensis FBgn0133805 N 0.706
estExt_Genewise1Plus.C_430054 Neurospora tetrasperma estExt_Genewise1Plus.C_430054 N 0.700
e_gw1.226.39.1 Physcomitrella patens e_gw1.226.39.1 N 0.700
AT3G13230 Arabidopsis thaliana AT3G13230-TAIR-G N 0.700
e_gw1.3.666.1 Neurospora discreta e_gw1.3.666.1 N 0.700
PDK_20s1552091g001 Phoenix dactylifera PDK_20s1552091g001 N 0.700
PTSG_04415 Salpingoeca rosetta PTSG_04415 N 0.700
ATEG_07413 Aspergillus terreus CADATEAG00001505 N 0.700
GLP15_4616 Giardia lamblia GLP15_4616 N 0.700
CJA15618 Caenorhabditis japonica CJA15618 N 0.700
NCU07956 Neurospora crassa NCU07956 N 0.700
XM_002882767.1 Arabidopsis lyrata scaffold_301521.1 N 0.700
fgenesh1_kg.C_scaffold_5000048 Selaginella moellendorfii fgenesh1_kg.C_scaffold_5000048 N 0.700
ACLA_088200 Aspergillus clavatus CADACLAG00008695 N 0.700