CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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e_gw1.2.756.1
(
Heterobasidion annosum
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
e_gw1.2.756.1
T21656_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
e_gw1.2.756.1
KH
135
184
LSRAIGRIAGQDGKTKFTIENASRTRIILADTKIHILGSVQNIKIARDAI
Links
Other
KH
family RBPs
Other
Heterobasidion annosum
RBPs
211 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
fgenesh3_pm.54__15
Postia placenta
fgenesh3_pm.54__15
N
0.960
e_gww2.1.865.1
Phanerochaete chrysosporium
e_gww2.1.865.1
N
0.960
e_gw1.12.287.1
Serpula lacrymans
e_gw1.12.287.1
N
0.940
gw1.1.2472.1
Pleurotus ostreatus
gw1.1.2472.1
N
0.940
e_gwh1.2.512.1
Laccaria bicolor
e_gwh1.2.512.1
N
0.900
estExt_fgenesh2_kg.C_20130
Agaricus bisporus
estExt_fgenesh2_kg.C_20130
N
0.900
e_gw1.2.2126.1
Schizophyllum commune
e_gw1.2.2126.1
N
0.900
RO3G_05288
Rhizopus oryzae
RO3G_05288
N
0.900
RO3G_00885
Rhizopus oryzae
RO3G_00885
N
0.900
estExt_Genewise1Plus.C_10658
Mucor circinelloides
estExt_Genewise1Plus.C_10658
N
0.880
e_gw1.15.315.1
Tremella mesenterica
e_gw1.15.315.1
N
0.880
PNO1
Taeniopygia guttata
ENSTGUG00000002369
N
0.840
estExt_Genewise1Plus.C_250095
Phycomyces blakesleeanus
estExt_Genewise1Plus.C_250095
N
0.840
XP_791733.2
Strongylocentrotus purpuratus
XP_791733.2
N
0.840
XP_001202155.1
Strongylocentrotus purpuratus
XP_001202155.1
N
0.840
XP_001202160.1
Strongylocentrotus purpuratus
XP_001202160.1
N
0.840
XP_798188.2
Strongylocentrotus purpuratus
XP_798188.2
N
0.840
pno1
Xenopus tropicalis
ENSXETG00000017349
N
0.820
Q6VBQ6_ORYLA
Oryzias latipes
ENSORLG00000002371
N
0.820
PTTG_01898
Puccinia triticina
PTTG_01898
N
0.820
pno1
Danio rerio
ENSDARG00000008502
N
0.820
PNO1_CHICK
Gallus gallus
ENSGALG00000009093
N
0.820
PNO1
Meleagris gallopavo
ENSMGAG00000004514
N
0.820
CNBG_1323
Cryptococcus neoformans
CNBG_1323
N
0.820
AMAG_12889
Allomyces macrogynus
AMAG_12889
N
0.820
AMAG_14219
Allomyces macrogynus
AMAG_14219
N
0.820
estExt_Genewise1.C_260084
Melampsora laricis populina
estExt_Genewise1.C_260084
N
0.820
GP3.070330
Batrachochytrium dendrobatidis
GP3.070330
N
0.820
PNO1
Gorilla gorilla
ENSGGOG00000009158
N
0.800
PNO1
Homo sapiens
ENSG00000115946
N
0.800
PNO1
Loxodonta africana
ENSLAFG00000000046
N
0.800
fgenesh2_pg.scaffold_196000015
Branchiostoma floridae
fgenesh2_pg.scaffold_196000015
N
0.800
PNO1
Macropus eugenii
ENSMEUG00000004504
N
0.800
XM_001095777.1
Macaca mulatta
ENSMMUG00000030357
N
0.800
Q7YRC8_MACMU
Macaca mulatta
ENSMMUG00000017461
N
0.800
PNO1
Microcebus murinus
ENSMICG00000010897
N
0.800
fgenesh1_pm.C_scaffold_5000030
Phytophthora ramorum
fgenesh1_pm.C_scaffold_5000030
N
0.800
fgenesh2_pm.scaffold_78000001
Branchiostoma floridae
fgenesh2_pm.scaffold_78000001
N
0.800
s_468317
Phytophthora sojae
s_468317
N
0.800
LOC100389955
Callithrix jacchus
ENSCJAG00000006564
N
0.800
PNO1
Canis familiaris
ENSCAFG00000003256
N
0.800
PNO1_BOVIN
Bos taurus
ENSBTAG00000010604
N
0.800
PNO1
Cavia porcellus
ENSCPOG00000010130
N
0.800
Ame_R013855
Ailuropoda melanoleuca
Ame_R013855
N
0.800
PNO1
Erinaceus europaeus
ENSEEUG00000009611
N
0.800
LOC100061904
Equus caballus
ENSECAG00000011263
N
0.800
Pno1
Dipodomys ordii
ENSDORG00000006867
N
0.800
PNO1
Monodelphis domestica
ENSMODG00000003567
N
0.800
ENSOCUG00000006100
Oryctolagus cuniculus
ENSOCUG00000006100
N
0.800
PNO1
Takifugu rubripes
ENSTRUG00000012470
N
0.800
PNO1
Anolis carolinensis
ENSACAG00000001218
N
0.800
PNO1
Tetraodon nigroviridis
ENSTNIG00000009825
N
0.800
estExt_Genewise1.C_5820041
Capitella teleta
estExt_Genewise1.C_5820041
N
0.800
PNO1
Tursiops truncatus
ENSTTRG00000014002
N
0.800
PNO1
Vicugna pacos
ENSVPAG00000012083
N
0.800
e_gw1.8.261.1
Sporobolomyces roseus
e_gw1.8.261.1
N
0.800
rbp28
Schizosaccharomyces pombe
SPAC2C4.11c
N
0.800
estExt_fgenesh1_kg.C_140013
Cochliobolus heterostrophus C5
estExt_fgenesh1_kg.C_140013
N
0.800
PNO1
Sus scrofa
ENSSSCG00000008352
N
0.800
Pno1
Rattus norvegicus
ENSRNOG00000005524
N
0.800
fgenesh1_pg.scaffold_18000119
Nematostella vectensis
fgenesh1_pg.scaffold_18000119
N
0.800
PNO1
Ochotona princeps
ENSOPRG00000009643
N
0.800
ENSOCUG00000022236
Oryctolagus cuniculus
ENSOCUG00000022236
N
0.800
Chlre2_kg.scaffold_20000177
Chlamydomonas reinhardtii
Chlre2_kg.scaffold_20000177
N
0.800
PNO1
Procavia capensis
ENSPCAG00000016146
N
0.800
ENSPPYG00000012353
Pongo pygmaeus
ENSPPYG00000012353
N
0.800
PNO1
Pteropus vampyrus
ENSPVAG00000012695
N
0.800
PNO1
Pan troglodytes
ENSPTRG00000011999
N
0.800
estExt_Genewise1Plus.C_600117
Volvox carteri
estExt_Genewise1Plus.C_600117
N
0.800
PNO1
Ornithorhynchus anatinus
ENSOANG00000008388
N
0.800
PNO1
Myotis lucifugus
ENSMLUG00000010850
N
0.800
SPRG_02415
Saprolegnia parasitica
SPRG_02415
N
0.800
XP_002162789.1
Hydra magnipapillata
XP_002162789.1
N
0.800
SPOG_00402
Schizosaccharomyces cryophilus
SPOG_00402
N
0.800
PITG_01680
Phytophthora infestans
PITG_01680
N
0.800
SOCG_04140
Schizosaccharomyces octosporus
SOCG_04140
N
0.780
SJAG_03872
Schizosaccharomyces japonicus
SJAG_03872
N
0.780
YALI0E01122g
Yarrowia lipolytica
YALI0E01122g
N
0.780
AAH42279
Xenopus laevis
AAH42279
N
0.780
AAQ24169
Xenopus laevis
AAQ24169
N
0.780
Q8AVH4
Xenopus laevis
Q8AVH4
N
0.780
Medtr3g080390
Medicago truncatula
Medtr3g080390
N
0.780
Pno1
Mus musculus
ENSMUSG00000020116
N
0.780
PNO1
Gasterosteus aculeatus
ENSGACG00000012047
N
0.780
estExt_fgenesh1_pg.C_190237
Phytophthora capsici
estExt_fgenesh1_pg.C_190237
N
0.780
EDP42908.1
Malassezia globosa
EDP42908.1
N
0.780
GSPATP00020703001
Paramecium tetraurelia
GSPATP00020703001
N
0.760
GSPATP00021981001
Paramecium tetraurelia
GSPATP00021981001
N
0.760
CPSG_08784
Coccidioides posadasii
CPSG_08784
N
0.760
3712.m00082
Tetrahymena thermophila
3712.m00082
N
0.760
Genemark1.5719_g
Coccomyxa C 169
Genemark1.5719_g
N
0.760
Glyma18g08100.1
Glycine max
Glyma18g08100.1
N
0.760
Glyma18g08080.1
Glycine max
Glyma18g08080.1
N
0.760
Glyma08g44800.1
Glycine max
Glyma08g44800.1
N
0.760
fgeneshTA2_pg.C_scaffold_14000176
Trichoplax adhaerens
fgeneshTA2_pg.C_scaffold_14000176
N
0.760
cassava30594.valid.m1
Manihot esculenta
cassava30594.valid.m1
N
0.760
fgeneshCV_pg.C_scaffold_11000142
Chlorella vulgaris
fgeneshCV_pg.C_scaffold_11000142
N
0.760
Scas_Contig632.19
Saccharomyces castellii
Scas_Contig632.19
N
0.760
SS1G_04290
Sclerotinia sclerotiorum
SS1G_04290
N
0.760
UM03495
Ustilago maydis
UM03495
N
0.760
BC1G_12211
Botrytis cinerea
BC1G_12211
N
0.760
ENSCJAG00000022611
Callithrix jacchus
ENSCJAG00000022611
N
0.760
CIMG_07268
Coccidioides immitis
CIMG_07268
N
0.760
Pc14g01220
Penicillium chrysogenum
Pc14g01220
N
0.760
EAT88982.1
Phaeosphaeria nodorum
EAT88982.1
N
0.740
estExt_genewise1_human.C_chr_1.20929
Pichia stipitis
estExt_genewise1_human.C_chr_1.20929
N
0.740
EFA79428.1
Polysphondylium pallidum
EFA79428.1
N
0.740
estExt_Genewise1Plus.C_chr_70397
Mycosphaerella graminicola
estExt_Genewise1Plus.C_chr_70397
N
0.740
B9GHH7_POPTR
Populus trichocarpa
POPTR_0001s47320
N
0.740
B9N5M8_POPTR
Populus trichocarpa
POPTR_0011s16880
N
0.740
27316
Aureococcus anophagefferens
27316
N
0.740
e_gw1.18.222.1
Chlorella NC64A
e_gw1.18.222.1
N
0.740
e_gw1.13.100.1
Volvox carteri
e_gw1.13.100.1
N
0.740
e_gwEuk.7.409.1
Ostreococcus lucimarinus
e_gwEuk.7.409.1
N
0.740
e_gw1.7.528.1
Ostreococcus RCC809
e_gw1.7.528.1
N
0.740
SAKL0G03740g
Lachancea kluyveri
SAKL0G03740g
N
0.740
e_gw1.4.614.1
Micromonas pusilla
e_gw1.4.614.1
N
0.740
e_gw1.3.1059.1
Mycosphaerella fijiensis
e_gw1.3.1059.1
N
0.740
Cucsa.201760
Cucumis sativus
Cucsa.201760
N
0.740
Cucsa.041830
Cucumis sativus
Cucsa.041830
N
0.740
28525.m000262
Ricinus communis
28525.m000262
N
0.740
TESG_04215
Trichophyton tonsurans
TESG_04215
N
0.740
cassava7030.valid.m1
Manihot esculenta
cassava7030.valid.m1
N
0.740
LjSGA_017760.2
Lotus japonicus
LjSGA_017760.2
N
0.740
ZYRO0D11440g
Zygosaccharomyces rouxii
ZYRO0D11440g
N
0.740
estExt_fgenesh1_pg.C_110137
Monosiga brevicollis
estExt_fgenesh1_pg.C_110137
N
0.740
estExt_fgenesh2_pm.C_sca_70005
Lottia gigantea
estExt_fgenesh2_pm.C_sca_70005
N
0.740
BDBG_01721
Blastomyces dermatitidis
BDBG_01721
N
0.740
SPPG_04498
Spizellomyces punctatus
SPPG_04498
N
0.740
ENSCING00000009577
Ciona intestinalis
ENSCING00000009577
N
0.740
TEQG_07954
Trichophyton equinum
TEQG_07954
N
0.740
ENSCSAVG00000001303
Ciona savignyi
ENSCSAVG00000001303
N
0.740
SNOG_03777
Stagonospora nodorum
SNOG_03777
N
0.740
MGYG_04767
Microsporum gypseum
MGYG_04767
N
0.740
orf19.7618
Candida albicans
orf19.7618
N
0.740
PTRG_02803
Pyrenophora tritici repentis
PTRG_02803
N
0.740
TERG_01665
Trichophyton rubrum
TERG_01665
N
0.740
CAGL0K09460g
Candida glabrata
CAGL0K09460g
N
0.740
WUBG_12774
Wuchereria bancrofti
WUBG_12774
N
0.740
UREG_07832
Uncinocarpus reesii
UREG_07832
N
0.740
TRV_03730
Trichophyton verrucosum
TRV_03730
N
0.740
amel4_ncbi_hmm14037
Apis mellifera
amel4_ncbi_hmm14037
N
0.740
DGIL_AUG5s4501g8t1
Acyrtosiphon pisum
DGIL_AUG5s4501g8t1
N
0.740
Cd36_35296
Candida dubliniensis
Cd36_35296
N
0.740
nasonia_NCBI_hmm120183
Nasonia vitripennis
nasonia_NCBI_hmm120183
N
0.740
MCYG_07269
Microsporum canis
MCYG_07269
N
0.740
A7THL8_VANPO
Vanderwaltozyma polyspora
A7THL8_VANPO
N
0.740
CPAG_01545
Candida parapsilosis
CPAG_01545
N
0.740
DEHA0G05258g
Debaryomyces hansenii
DEHA0G05258g
N
0.740
CLUG_01545
Candida lusitaniae
CLUG_01545
N
0.740
Bm1_42995
Brugia malayi
Bm1_42995
N
0.740
ARB_00984
Arthroderma benhamiae
ARB_00984
N
0.740
BGIBMGA014064
Bombyx mori
BGIBMGA014064
N
0.740
CTRG_05813
Candida tropicalis
CTRG_05813
N
0.740
XM_001110046.1
Macaca mulatta
ENSMMUG00000003556
N
0.740
LELG_05249
Lodderomyces elongisporus
LELG_05249
N
0.740
HCAG_04100
Histoplasma capsulatum
HCAG_04100
N
0.740
LOAG_05624
Loa loa
LOAG_05624
N
0.740
GK20148
Drosophila willistoni
FBgn0222145
N
0.725
fgenesh1_pg.C_scaffold_107000027
Daphnia pulex
fgenesh1_pg.C_scaffold_107000027
N
0.720
estExt_Genewise1Plus.C_91132
Trichoderma virens
estExt_Genewise1Plus.C_91132
N
0.720
MDP0000120063
Malus x domestica
MDP0000120063
N
0.720
Skud_Contig1833.8
Saccharomyces kudriavzevii
Skud_Contig1833.8
N
0.720
MDP0000136407
Malus x domestica
MDP0000136407
N
0.720
fgenesh1_pm.C_scaffold_14000035
Trichoderma atroviride
fgenesh1_pm.C_scaffold_14000035
N
0.720
KLLA0C06446g
Kluyveromyces lactis
KLLA0C06446g
N
0.720
0700010277
Ostreococcus tauri
0700010277
N
0.720
23888_YOR145C
Saccharomyces bayanus
23888_YOR145C
N
0.720
KLTH0G02574g
Kluyveromyces thermotolerans
KLTH0G02574g
N
0.720
20872_YOR145C
Saccharomyces paradoxus
20872_YOR145C
N
0.720
Kwal_18864
Kluyveromyces waltii
Kwal_18864
N
0.720
GID1.0042265
Dictyostelium purpureum
GID1.0042265
N
0.720
THAPSDRAFT_35041
Thalassiosira pseudonana
Thaps35041
N
0.720
pno1
Dictyostelium discoideum
DDB_G0287557
N
0.720
ATEG_07413
Aspergillus terreus
CADATEAG00001505
N
0.720
PHUM356890
Pediculus humanus
PHUM356890
N
0.720
EDI_198550
Entamoeba dispar
EDI_198550
N
0.720
PGUG_02960
Candida guilliermondii
PGUG_02960
N
0.720
PABG_01374
Paracoccidioides brasiliensis
PABG_01374
N
0.720
FOXG_00036
Fusarium oxysporum
FOXG_00036
N
0.720
FGSG_01345
Fusarium graminearum
FGSG_01345
N
0.720
FVEG_01480
Fusarium verticillioides
FVEG_01480
N
0.720
EHI_065870
Entamoeba histolytica
EHI_065870
N
0.720
PNO1
Saccharomyces cerevisiae
YOR145C
N
0.720
estExt_fgenesh1_pg.C_sca_1_chr1_3_00036
Nectria haematococca
estExt_fgenesh1_pg.C_sca_1_chr1_3_00036
N
0.720
estExt_fgenesh5_pg.C_40050
Trichoderma reesei
estExt_fgenesh5_pg.C_40050
N
0.720
MDP0000754021
Malus x domestica
MDP0000754021
N
0.720
MDP0000265633
Malus x domestica
MDP0000265633
N
0.720
PNO1
Ashbya gossypii
PNO1
N
0.720
PK08146.1
Cannabis sativa
PK08146.1
N
0.720
ppa011086m
Prunus persica
ppa011086m
N
0.720
ppa009897m
Prunus persica
ppa009897m
N
0.720
GJ15820
Drosophila virilis
FBgn0203007
N
0.706
GH12628
Drosophila grimshawi
FBgn0120107
N
0.706
20359_YOR145C
Saccharomyces mikatae
20359_YOR145C
N
0.706
GA11169-RA
Drosophila pseudoobscura
FBgn0071224
N
0.706
BGIOSIBCE009391
Oryza indica
BGIOSIBCE009391
N
0.700
ACLA_088200
Aspergillus clavatus
CADACLAG00008695
N
0.700
BRADI2G52180
Brachypodium distachyon
BRADI2G52180
N
0.700
e_gw1.3.2749.1
Cryphonectria parasitica
e_gw1.3.2749.1
N
0.700
GRMZM2G085005
Zea mays
GRMZM2G085005
N
0.700
SB03G036840
Sorghum bicolor
Sb03g036840
N
0.700
GLP15_4616
Giardia lamblia
GLP15_4616
N
0.700
GSTUMT00003923001
Tuber melanosporum
GSTUMT00003923001
N
0.700
PDK_20s1554761g001
Phoenix dactylifera
PDK_20s1554761g001
N
0.700
mgf006621m
Mimulus guttatus
mgf006621m
N
0.700
PHATRDRAFT_9929
Phaeodactylum tricornutum
Phatr9929
N
0.700
LOC_Os03g02420
Oryza sativa
LOC_Os03g02420
N
0.700
GRMZM2G139198
Zea mays
GRMZM2G139198
N
0.700
estExt_Genewise1Plus.C_10659
Myceliophthora thermophila
estExt_Genewise1Plus.C_10659
N
0.700
LOC_Os01g57910
Oryza sativa
LOC_Os01g57910
N
0.700