CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Sjc_0083680
(
Schistosoma japonicum
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
Sjc_0083680
T21472_0.6
SDSPB (2008-Sep-5)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CPRT0000007877
KH
161
210
FVKRRNRLIGHDGETLKALELSTNCYIVVQGKTVSVVGRYNDLKEVRKIV
Links
Other
KH
family RBPs
Other
Schistosoma japonicum
RBPs
33 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Smp_115060
Schistosoma mansoni
Smp_115060
N
1.000
KRR1
Erinaceus europaeus
ENSEEUG00000001466
N
0.725
Ame_R008803
Ailuropoda melanoleuca
Ame_R008803
N
0.725
KRR1
Tupaia belangeri
ENSTBEG00000008145
N
0.725
LOC100050169
Equus caballus
ENSECAG00000017498
N
0.725
KRR1
Monodelphis domestica
ENSMODG00000020451
N
0.725
KRR1
Macropus eugenii
ENSMEUG00000011365
N
0.725
XM_846783.1
Canis familiaris
ENSCAFG00000005665
N
0.725
KRR1
Sorex araneus
ENSSARG00000009967
N
0.706
KRR1
Pteropus vampyrus
ENSPVAG00000000529
N
0.706
XR_025480.1
Pan troglodytes
ENSPTRG00000005238
N
0.706
KRR1
Sus scrofa
ENSSSCG00000000520
N
0.706
ENSPPYG00000004785
Pongo pygmaeus
ENSPPYG00000004785
N
0.706
KRR1
Spermophilus tridecemlineatus
ENSSTOG00000003620
N
0.706
mis3
Schizosaccharomyces pombe
SPBC25B2.05
N
0.706
eu2.Lbscf0025g00750
Laccaria bicolor
eu2.Lbscf0025g00750
N
0.706
KRR1
Tursiops truncatus
ENSTTRG00000001661
N
0.706
KRR1
Tarsius syrichta
ENSTSYG00000009394
N
0.706
KRR1_BOVIN
Bos taurus
ENSBTAG00000011591
N
0.706
KRR1
Ochotona princeps
ENSOPRG00000011858
N
0.706
KRR1
Oryctolagus cuniculus
ENSOCUG00000003925
N
0.706
LOC100407700
Callithrix jacchus
ENSCJAG00000001181
N
0.706
KRR1
Felis catus
ENSFCAG00000005207
N
0.706
KRR1
Cavia porcellus
ENSCPOG00000014353
N
0.706
Krr1
Dipodomys ordii
ENSDORG00000004614
N
0.706
KRR1
Dasypus novemcinctus
ENSDNOG00000015614
N
0.706
KRR1
Homo sapiens
ENSG00000111615
N
0.706
KRR1
Gasterosteus aculeatus
ENSGACG00000019481
N
0.706
KRR1
Danio rerio
ENSDARG00000011246
N
0.706
KRR1
Macaca mulatta
ENSMMUG00000009640
N
0.706
KRR1
Choloepus hoffmanni
ENSCHOG00000009636
N
0.706
KRR1
Gorilla gorilla
ENSGGOG00000013596
N
0.706
KRR1
Otolemur garnettii
ENSOGAG00000010313
N
0.706