KRR1 (Spermophilus tridecemlineatus)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSSTOG00000003620 T19518_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSSTOP00000003243 KH 128 177

Links

Other KH family RBPs
Other Spermophilus tridecemlineatus RBPs

149 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
KRR1 Gorilla gorilla ENSGGOG00000013596 N 1.000
KRR1 Felis catus ENSFCAG00000005207 N 1.000
KRR1 Macaca mulatta ENSMMUG00000009640 N 1.000
KRR1 Oryctolagus cuniculus ENSOCUG00000003925 N 1.000
KRR1 Otolemur garnettii ENSOGAG00000010313 N 1.000
Krr1 Dipodomys ordii ENSDORG00000004614 N 1.000
KRR1 Dasypus novemcinctus ENSDNOG00000015614 N 1.000
KRR1_BOVIN Bos taurus ENSBTAG00000011591 N 1.000
KRR1 Choloepus hoffmanni ENSCHOG00000009636 N 1.000
LOC100407700 Callithrix jacchus ENSCJAG00000001181 N 1.000
KRR1 Cavia porcellus ENSCPOG00000014353 N 1.000
KRR1 Ochotona princeps ENSOPRG00000011858 N 1.000
KRR1 Homo sapiens ENSG00000111615 N 1.000
XR_025480.1 Pan troglodytes ENSPTRG00000005238 N 1.000
KRR1 Tursiops truncatus ENSTTRG00000001661 N 1.000
KRR1 Sus scrofa ENSSSCG00000000520 N 1.000
KRR1 Sorex araneus ENSSARG00000009967 N 1.000
KRR1 Tarsius syrichta ENSTSYG00000009394 N 1.000
KRR1 Pteropus vampyrus ENSPVAG00000000529 N 1.000
ENSPPYG00000004785 Pongo pygmaeus ENSPPYG00000004785 N 1.000
LOC100050169 Equus caballus ENSECAG00000017498 N 0.980
KRR1 Erinaceus europaeus ENSEEUG00000001466 N 0.980
Hrb2 Rattus norvegicus ENSRNOG00000004035 N 0.980
KRR1 Loxodonta africana ENSLAFG00000015986 N 0.980
Ame_R008803 Ailuropoda melanoleuca Ame_R008803 N 0.980
XM_846783.1 Canis familiaris ENSCAFG00000005665 N 0.980
Krr1 Mus musculus ENSMUSG00000063334 N 0.980
KRR1 Tupaia belangeri ENSTBEG00000008145 N 0.980
KRR1 Monodelphis domestica ENSMODG00000020451 N 0.960
KRR1 Macropus eugenii ENSMEUG00000011365 N 0.960
KRR1 Gasterosteus aculeatus ENSGACG00000019481 N 0.940
KRR1 Danio rerio ENSDARG00000011246 N 0.940
KRR1 Takifugu rubripes ENSTRUG00000004380 N 0.940
KRR1 Vicugna pacos ENSVPAG00000011750 N 0.940
KRR1 Meleagris gallopavo ENSMGAG00000010844 N 0.922
Q5ZKE0_CHICK Gallus gallus ENSGALG00000010227 N 0.922
krr1 Xenopus tropicalis ENSXETG00000013312 N 0.920
KRR1 Procavia capensis ENSPCAG00000010269 N 0.900
KRR1 Microcebus murinus ENSMICG00000015127 N 0.900
ENSETEG00000001656 Echinops telfairi ENSETEG00000001656 N 0.880
KRR1 Myotis lucifugus ENSMLUG00000002339 N 0.880
2245_YCL059C Saccharomyces mikatae 2245_YCL059C N 0.840
2217_YCL059C Saccharomyces paradoxus 2217_YCL059C N 0.840
2380_YCL059C Saccharomyces bayanus 2380_YCL059C N 0.840
PGUG_03304 Candida guilliermondii PGUG_03304 N 0.840
estExt_Genewise1.C_20589 Coccomyxa C 169 estExt_Genewise1.C_20589 N 0.840
estExt_Genewise1Plus.C_20668 Chlorella vulgaris estExt_Genewise1Plus.C_20668 N 0.840
DEHA0E14685g Debaryomyces hansenii DEHA0E14685g N 0.840
Skud_Contig2065.14 Saccharomyces kudriavzevii Skud_Contig2065.14 N 0.840
SAKL0C00484g Lachancea kluyveri SAKL0C00484g N 0.840
KRR1 Saccharomyces cerevisiae YCL059C N 0.840
KRR1 Oryzias latipes ENSORLG00000019616 N 0.821
Kwal_13011 Kluyveromyces waltii Kwal_13011 N 0.820
XP_786725.1 Strongylocentrotus purpuratus XP_786725.1 N 0.804
XP_001186312.1 Strongylocentrotus purpuratus XP_001186312.1 N 0.804
LELG_00899 Lodderomyces elongisporus LELG_00899 N 0.800
CLUG_04903 Candida lusitaniae CLUG_04903 N 0.800
PMAA_048600 Penicillium marneffei PMAA_048600 N 0.800
CTRG_04103 Candida tropicalis CTRG_04103 N 0.800
KLLA0C00506g Kluyveromyces lactis KLLA0C00506g N 0.800
GSPATP00022892001 Paramecium tetraurelia GSPATP00022892001 N 0.800
e_gwh1.2.1.2136.1 Pichia stipitis e_gwh1.2.1.2136.1 N 0.800
PTSG_07198 Salpingoeca rosetta PTSG_07198 N 0.800
A7TFC5_VANPO Vanderwaltozyma polyspora A7TFC5_VANPO N 0.800
KRR1 Candida albicans orf19.661 N 0.800
SPPG_02913 Spizellomyces punctatus SPPG_02913 N 0.800
Cd36_10710 Candida dubliniensis Cd36_10710 N 0.800
KLTH0F00506g Kluyveromyces thermotolerans KLTH0F00506g N 0.792
AAH72210 Xenopus laevis AAH72210 N 0.789
estExt_fgenesh4_pg.C_90052 Volvox carteri estExt_fgenesh4_pg.C_90052 N 0.784
Aqu1.217752 Amphimedon queenslandica Aqu1.217752 N 0.784
ATEG_01441 Aspergillus terreus CADATEAG00000360 N 0.780
AGAP007912 Anopheles gambiae AGAP007912 N 0.780
XP_002158002.1 Hydra magnipapillata XP_002158002.1 N 0.780
estExt_fgenesh3_pg.C_140192 Chlorella NC64A estExt_fgenesh3_pg.C_140192 N 0.780
pasa_Sanger_mRNA6968 Chlamydomonas reinhardtii pasa_Sanger_mRNA6968 N 0.780
e_gw1.1.604.1 Mucor circinelloides e_gw1.1.604.1 N 0.780
estExt_fgenesh1_pg.C_70293 Batrachochytrium dendrobatidis estExt_fgenesh1_pg.C_70293 N 0.780
AAH41273 Xenopus laevis AAH41273 N 0.776
XP_002489989.1 Pichia pastoris XP_002489989.1 N 0.769
e_gw1.35.542.1 Selaginella moellendorfii e_gw1.35.542.1 N 0.765
BDBG_00628 Blastomyces dermatitidis BDBG_00628 N 0.760
RO3G_15602 Rhizopus oryzae RO3G_15602 N 0.760
e_gwh2.2.654.1 Phanerochaete chrysosporium e_gwh2.2.654.1 N 0.760
e_gw1.10.100.1 Phycomyces blakesleeanus e_gw1.10.100.1 N 0.760
GLRG_02756 Colletotrichum graminicola GLRG_02756 N 0.760
CC1G_09940 Coprinopsis cinerea CC1G_09940 N 0.760
PK22510.1 Cannabis sativa PK22510.1 N 0.760
estExt_fgenesh2_pg.C_210023 Monosiga brevicollis estExt_fgenesh2_pg.C_210023 N 0.760
CPAG_00706 Candida parapsilosis CPAG_00706 N 0.760
UM03241 Ustilago maydis UM03241 N 0.760
PHATRDRAFT_45441 Phaeodactylum tricornutum Phatr45441 N 0.745
ZYRO0F18458g Zygosaccharomyces rouxii ZYRO0F18458g N 0.745
FGSG_06203 Fusarium graminearum FGSG_06203 N 0.740
e_gw1.11.691.1 Mycosphaerella fijiensis e_gw1.11.691.1 N 0.740
estExt_fgenesh1_pg.C_chr_50346 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_50346 N 0.740
e_gw1.07.00.268.1 Ostreococcus tauri e_gw1.07.00.268.1 N 0.740
PredSwiss_ASS2010_156.1 Pneumocystis carinii PredSwiss_ASS2010_156.1 N 0.740
eu2.Lbscf0025g00750 Laccaria bicolor eu2.Lbscf0025g00750 N 0.740
estExt_Genewise1.C_250056 Neurospora tetrasperma estExt_Genewise1.C_250056 N 0.740
estExt_fgenesh2_kg.C_20554 Agaricus bisporus estExt_fgenesh2_kg.C_20554 N 0.740
fgenesh1_pm.00866_#_279 Aspergillus carbonarius fgenesh1_pm.00866_#_279 N 0.740
Pc15g00270 Penicillium chrysogenum Pc15g00270 N 0.740
NCU07041 Neurospora crassa NCU07041 N 0.740
Pa_1_24010 Podospora anserina Pa_1_24010 N 0.740
estExt_Genewise1Plus.C_120457 Neurospora discreta estExt_Genewise1Plus.C_120457 N 0.740
e_gw1.7.303.1 Ostreococcus RCC809 e_gw1.7.303.1 N 0.740
PASA_GEN_0400107 Daphnia pulex PASA_GEN_0400107 N 0.737
ENSCAFG00000000528 Canis familiaris ENSCAFG00000000528 N 0.725
MDP0000221204 Malus x domestica MDP0000221204 N 0.720
e_gw1.1.3483.1 Schizophyllum commune e_gw1.1.3483.1 N 0.720
CMU_000450 Cryptosporidium muris CMU_000450 N 0.720
THAPSDRAFT_268598 Thalassiosira pseudonana Thaps268598 N 0.720
estExt_fgenesh2_pm.C_40064 Thielavia terrestris estExt_fgenesh2_pm.C_40064 N 0.720
estExt_fgenesh3_pm.C_180006 Postia placenta estExt_fgenesh3_pm.C_180006 N 0.720
estExt_Genewise1Plus.C_250151 Melampsora laricis populina estExt_Genewise1Plus.C_250151 N 0.720
estExt_Genewise1.C_80450 Myceliophthora thermophila estExt_Genewise1.C_80450 N 0.720
mis3 Schizosaccharomyces pombe SPBC25B2.05 N 0.720
GE15854 Drosophila yakuba FBgn0233416 N 0.720
GG24622 Drosophila erecta FBgn0116754 N 0.720
GA18062-RA Drosophila pseudoobscura FBgn0078070 N 0.720
dbe Drosophila melanogaster FBgn0020305 N 0.720
GI18007 Drosophila mojavensis FBgn0140747 N 0.720
GL18627 Drosophila persimilis FBgn0156228 N 0.720
GK24616 Drosophila willistoni FBgn0226576 N 0.720
GJ19628 Drosophila virilis FBgn0206770 N 0.720
eugene.0700010461 Ostreococcus lucimarinus eugene.0700010461 N 0.720
fgenesh_newKGs_kg.437__12__2686076:1 Emiliania huxleyi fgenesh_newKGs_kg.437__12__2686076:1 N 0.720
AMAG_09721 Allomyces macrogynus AMAG_09721 N 0.720
Genemark.4150_g Heterobasidion annosum Genemark.4150_g N 0.720
gw1.3.2120.1 Cryphonectria parasitica gw1.3.2120.1 N 0.720
MDP0000130613 Malus x domestica MDP0000130613 N 0.720
AMAG_07778 Allomyces macrogynus AMAG_07778 N 0.720
fgenesh1_pm.C_scaffold_4000135 Pleurotus ostreatus fgenesh1_pm.C_scaffold_4000135 N 0.720
fgenesh2_kg.4_#_366_#_2882_1_CFPN Serpula lacrymans fgenesh2_kg.4_#_366_#_2882_1_CFPN N 0.720
3707.m00252 Tetrahymena thermophila 3707.m00252 N 0.720
EDP43963.1 Malassezia globosa EDP43963.1 N 0.720
Sjc_0083680 Schistosoma japonicum Sjc_0083680 N 0.706
Bm1_51375 Brugia malayi Bm1_51375 N 0.706
WUBG_00259 Wuchereria bancrofti WUBG_00259 N 0.706
Smp_115060 Schistosoma mansoni Smp_115060 N 0.706
CNBG_5932 Cryptococcus neoformans CNBG_5932 N 0.700
YALI0F30393g Yarrowia lipolytica YALI0F30393g N 0.700
cgd3_2950 Cryptosporidium parvum cgd3_2950 N 0.700
e_gw1.7.291.1 Tremella mesenterica e_gw1.7.291.1 N 0.700
Chro.30334 Cryptosporidium hominis Chro.30334 N 0.700
Medtr5g094630 Medicago truncatula Medtr5g094630 N 0.700
TP02_0631 Theileria parva TP02_0631 N 0.700
XP_002154857.1 Hydra magnipapillata XP_002154857.1 N 0.700