CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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KRR1
(
Macropus eugenii
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
ENSMEUG00000011365
T18962_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMEUP00000010367
KH
128
177
FVKRRQRLIGPKGSTLKALELLTNCYIMVQGNTVSALGPFNGLKEVRKVV
Links
Other
KH
family RBPs
Other
Macropus eugenii
RBPs
146 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
KRR1
Monodelphis domestica
ENSMODG00000020451
N
1.000
KRR1
Gasterosteus aculeatus
ENSGACG00000019481
N
0.980
LOC100050169
Equus caballus
ENSECAG00000017498
N
0.980
KRR1
Tupaia belangeri
ENSTBEG00000008145
N
0.980
KRR1
Danio rerio
ENSDARG00000011246
N
0.980
KRR1
Sus scrofa
ENSSSCG00000000520
N
0.960
KRR1
Spermophilus tridecemlineatus
ENSSTOG00000003620
N
0.960
KRR1
Tarsius syrichta
ENSTSYG00000009394
N
0.960
KRR1
Dasypus novemcinctus
ENSDNOG00000015614
N
0.960
LOC100407700
Callithrix jacchus
ENSCJAG00000001181
N
0.960
KRR1
Cavia porcellus
ENSCPOG00000014353
N
0.960
KRR1
Sorex araneus
ENSSARG00000009967
N
0.960
Krr1
Dipodomys ordii
ENSDORG00000004614
N
0.960
KRR1
Tursiops truncatus
ENSTTRG00000001661
N
0.960
KRR1
Pteropus vampyrus
ENSPVAG00000000529
N
0.960
KRR1
Otolemur garnettii
ENSOGAG00000010313
N
0.960
KRR1
Oryctolagus cuniculus
ENSOCUG00000003925
N
0.960
KRR1
Macaca mulatta
ENSMMUG00000009640
N
0.960
KRR1
Gorilla gorilla
ENSGGOG00000013596
N
0.960
KRR1
Ochotona princeps
ENSOPRG00000011858
N
0.960
KRR1
Homo sapiens
ENSG00000111615
N
0.960
KRR1
Choloepus hoffmanni
ENSCHOG00000009636
N
0.960
XR_025480.1
Pan troglodytes
ENSPTRG00000005238
N
0.960
ENSPPYG00000004785
Pongo pygmaeus
ENSPPYG00000004785
N
0.960
KRR1_BOVIN
Bos taurus
ENSBTAG00000011591
N
0.960
KRR1
Felis catus
ENSFCAG00000005207
N
0.960
XM_846783.1
Canis familiaris
ENSCAFG00000005665
N
0.940
KRR1
Erinaceus europaeus
ENSEEUG00000001466
N
0.940
KRR1
Loxodonta africana
ENSLAFG00000015986
N
0.940
Ame_R008803
Ailuropoda melanoleuca
Ame_R008803
N
0.940
Krr1
Mus musculus
ENSMUSG00000063334
N
0.940
KRR1
Takifugu rubripes
ENSTRUG00000004380
N
0.940
Hrb2
Rattus norvegicus
ENSRNOG00000004035
N
0.940
Q5ZKE0_CHICK
Gallus gallus
ENSGALG00000010227
N
0.922
KRR1
Meleagris gallopavo
ENSMGAG00000010844
N
0.922
krr1
Xenopus tropicalis
ENSXETG00000013312
N
0.920
KRR1
Vicugna pacos
ENSVPAG00000011750
N
0.900
ENSETEG00000001656
Echinops telfairi
ENSETEG00000001656
N
0.880
KRR1
Microcebus murinus
ENSMICG00000015127
N
0.860
KRR1
Procavia capensis
ENSPCAG00000010269
N
0.860
KRR1
Oryzias latipes
ENSORLG00000019616
N
0.857
estExt_Genewise1.C_20589
Coccomyxa C 169
estExt_Genewise1.C_20589
N
0.840
SAKL0C00484g
Lachancea kluyveri
SAKL0C00484g
N
0.840
estExt_Genewise1Plus.C_20668
Chlorella vulgaris
estExt_Genewise1Plus.C_20668
N
0.840
Skud_Contig2065.14
Saccharomyces kudriavzevii
Skud_Contig2065.14
N
0.840
2245_YCL059C
Saccharomyces mikatae
2245_YCL059C
N
0.840
2217_YCL059C
Saccharomyces paradoxus
2217_YCL059C
N
0.840
2380_YCL059C
Saccharomyces bayanus
2380_YCL059C
N
0.840
DEHA0E14685g
Debaryomyces hansenii
DEHA0E14685g
N
0.840
KRR1
Saccharomyces cerevisiae
YCL059C
N
0.840
KRR1
Myotis lucifugus
ENSMLUG00000002339
N
0.840
PGUG_03304
Candida guilliermondii
PGUG_03304
N
0.840
Kwal_13011
Kluyveromyces waltii
Kwal_13011
N
0.820
AAH72210
Xenopus laevis
AAH72210
N
0.807
XP_001186312.1
Strongylocentrotus purpuratus
XP_001186312.1
N
0.804
XP_786725.1
Strongylocentrotus purpuratus
XP_786725.1
N
0.804
A7TFC5_VANPO
Vanderwaltozyma polyspora
A7TFC5_VANPO
N
0.800
Cd36_10710
Candida dubliniensis
Cd36_10710
N
0.800
CLUG_04903
Candida lusitaniae
CLUG_04903
N
0.800
SPPG_02913
Spizellomyces punctatus
SPPG_02913
N
0.800
KRR1
Candida albicans
orf19.661
N
0.800
PMAA_048600
Penicillium marneffei
PMAA_048600
N
0.800
LELG_00899
Lodderomyces elongisporus
LELG_00899
N
0.800
CTRG_04103
Candida tropicalis
CTRG_04103
N
0.800
KLLA0C00506g
Kluyveromyces lactis
KLLA0C00506g
N
0.800
e_gwh1.2.1.2136.1
Pichia stipitis
e_gwh1.2.1.2136.1
N
0.800
AAH41273
Xenopus laevis
AAH41273
N
0.793
KLTH0F00506g
Kluyveromyces thermotolerans
KLTH0F00506g
N
0.792
estExt_fgenesh4_pg.C_90052
Volvox carteri
estExt_fgenesh4_pg.C_90052
N
0.784
PTSG_07198
Salpingoeca rosetta
PTSG_07198
N
0.780
GSPATP00022892001
Paramecium tetraurelia
GSPATP00022892001
N
0.780
estExt_fgenesh1_pg.C_70293
Batrachochytrium dendrobatidis
estExt_fgenesh1_pg.C_70293
N
0.780
ATEG_01441
Aspergillus terreus
CADATEAG00000360
N
0.780
estExt_fgenesh3_pg.C_140192
Chlorella NC64A
estExt_fgenesh3_pg.C_140192
N
0.780
pasa_Sanger_mRNA6968
Chlamydomonas reinhardtii
pasa_Sanger_mRNA6968
N
0.780
e_gw1.1.604.1
Mucor circinelloides
e_gw1.1.604.1
N
0.780
XP_002489989.1
Pichia pastoris
XP_002489989.1
N
0.769
e_gw1.35.542.1
Selaginella moellendorfii
e_gw1.35.542.1
N
0.765
Aqu1.217752
Amphimedon queenslandica
Aqu1.217752
N
0.765
CC1G_09940
Coprinopsis cinerea
CC1G_09940
N
0.760
estExt_fgenesh2_pg.C_210023
Monosiga brevicollis
estExt_fgenesh2_pg.C_210023
N
0.760
CPAG_00706
Candida parapsilosis
CPAG_00706
N
0.760
RO3G_15602
Rhizopus oryzae
RO3G_15602
N
0.760
AGAP007912
Anopheles gambiae
AGAP007912
N
0.760
e_gw1.10.100.1
Phycomyces blakesleeanus
e_gw1.10.100.1
N
0.760
PK22510.1
Cannabis sativa
PK22510.1
N
0.760
UM03241
Ustilago maydis
UM03241
N
0.760
e_gwh2.2.654.1
Phanerochaete chrysosporium
e_gwh2.2.654.1
N
0.760
XP_002158002.1
Hydra magnipapillata
XP_002158002.1
N
0.760
GLRG_02756
Colletotrichum graminicola
GLRG_02756
N
0.760
BDBG_00628
Blastomyces dermatitidis
BDBG_00628
N
0.760
ZYRO0F18458g
Zygosaccharomyces rouxii
ZYRO0F18458g
N
0.745
PHATRDRAFT_45441
Phaeodactylum tricornutum
Phatr45441
N
0.745
GJ19628
Drosophila virilis
FBgn0206770
N
0.740
GL18627
Drosophila persimilis
FBgn0156228
N
0.740
e_gw1.07.00.268.1
Ostreococcus tauri
e_gw1.07.00.268.1
N
0.740
Pa_1_24010
Podospora anserina
Pa_1_24010
N
0.740
FGSG_06203
Fusarium graminearum
FGSG_06203
N
0.740
fgenesh1_pm.00866_#_279
Aspergillus carbonarius
fgenesh1_pm.00866_#_279
N
0.740
estExt_fgenesh2_kg.C_20554
Agaricus bisporus
estExt_fgenesh2_kg.C_20554
N
0.740
GG24622
Drosophila erecta
FBgn0116754
N
0.740
PredSwiss_ASS2010_156.1
Pneumocystis carinii
PredSwiss_ASS2010_156.1
N
0.740
NCU07041
Neurospora crassa
NCU07041
N
0.740
GE15854
Drosophila yakuba
FBgn0233416
N
0.740
e_gw1.11.691.1
Mycosphaerella fijiensis
e_gw1.11.691.1
N
0.740
dbe
Drosophila melanogaster
FBgn0020305
N
0.740
estExt_fgenesh1_pg.C_chr_50346
Mycosphaerella graminicola
estExt_fgenesh1_pg.C_chr_50346
N
0.740
GA18062-RA
Drosophila pseudoobscura
FBgn0078070
N
0.740
GI18007
Drosophila mojavensis
FBgn0140747
N
0.740
e_gw1.7.303.1
Ostreococcus RCC809
e_gw1.7.303.1
N
0.740
estExt_Genewise1.C_250056
Neurospora tetrasperma
estExt_Genewise1.C_250056
N
0.740
estExt_Genewise1Plus.C_120457
Neurospora discreta
estExt_Genewise1Plus.C_120457
N
0.740
Pc15g00270
Penicillium chrysogenum
Pc15g00270
N
0.740
eu2.Lbscf0025g00750
Laccaria bicolor
eu2.Lbscf0025g00750
N
0.740
GK24616
Drosophila willistoni
FBgn0226576
N
0.740
PASA_GEN_0400107
Daphnia pulex
PASA_GEN_0400107
N
0.737
Sjc_0083680
Schistosoma japonicum
Sjc_0083680
N
0.725
Smp_115060
Schistosoma mansoni
Smp_115060
N
0.725
MDP0000130613
Malus x domestica
MDP0000130613
N
0.720
estExt_Genewise1Plus.C_250151
Melampsora laricis populina
estExt_Genewise1Plus.C_250151
N
0.720
fgenesh2_kg.4_#_366_#_2882_1_CFPN
Serpula lacrymans
fgenesh2_kg.4_#_366_#_2882_1_CFPN
N
0.720
MDP0000221204
Malus x domestica
MDP0000221204
N
0.720
e_gw1.1.3483.1
Schizophyllum commune
e_gw1.1.3483.1
N
0.720
mis3
Schizosaccharomyces pombe
SPBC25B2.05
N
0.720
estExt_fgenesh2_pm.C_40064
Thielavia terrestris
estExt_fgenesh2_pm.C_40064
N
0.720
estExt_fgenesh3_pm.C_180006
Postia placenta
estExt_fgenesh3_pm.C_180006
N
0.720
estExt_Genewise1.C_80450
Myceliophthora thermophila
estExt_Genewise1.C_80450
N
0.720
Genemark.4150_g
Heterobasidion annosum
Genemark.4150_g
N
0.720
gw1.3.2120.1
Cryphonectria parasitica
gw1.3.2120.1
N
0.720
AMAG_09721
Allomyces macrogynus
AMAG_09721
N
0.720
fgenesh_newKGs_kg.437__12__2686076:1
Emiliania huxleyi
fgenesh_newKGs_kg.437__12__2686076:1
N
0.720
eugene.0700010461
Ostreococcus lucimarinus
eugene.0700010461
N
0.720
fgenesh1_pm.C_scaffold_4000135
Pleurotus ostreatus
fgenesh1_pm.C_scaffold_4000135
N
0.720
THAPSDRAFT_268598
Thalassiosira pseudonana
Thaps268598
N
0.720
EDP43963.1
Malassezia globosa
EDP43963.1
N
0.720
AMAG_07778
Allomyces macrogynus
AMAG_07778
N
0.720
Bm1_51375
Brugia malayi
Bm1_51375
N
0.706
ENSCSAVG00000008600
Ciona savignyi
ENSCSAVG00000008600
N
0.706
WUBG_00259
Wuchereria bancrofti
WUBG_00259
N
0.706
ENSCAFG00000000528
Canis familiaris
ENSCAFG00000000528
N
0.706
YALI0F30393g
Yarrowia lipolytica
YALI0F30393g
N
0.700
e_gw1.7.291.1
Tremella mesenterica
e_gw1.7.291.1
N
0.700
CNBG_5932
Cryptococcus neoformans
CNBG_5932
N
0.700
Medtr5g094630
Medicago truncatula
Medtr5g094630
N
0.700
3707.m00252
Tetrahymena thermophila
3707.m00252
N
0.700
CMU_000450
Cryptosporidium muris
CMU_000450
N
0.700