CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Larp4
(
Dipodomys ordii
)
La
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF05383 (La)
IPR006630
ENSDORG00000004013
T22731_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDORP00000003747
La
132
180
XXENLSKDLYLISQMDSDQFIPIWTVANMEEIKKLTTDLDLILEVLRXX
Links
Other
La
family RBPs
Other
Dipodomys ordii
RBPs
36 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
LARP4
Otolemur garnettii
ENSOGAG00000001415
N
0.939
LARP4
Echinops telfairi
ENSETEG00000011683
N
0.939
LARP4
Erinaceus europaeus
ENSEEUG00000000316
N
0.939
LARP4
Microcebus murinus
ENSMICG00000012388
N
0.918
ENSRNOG00000032588
Rattus norvegicus
ENSRNOG00000032588
N
0.898
LARP4
Loxodonta africana
ENSLAFG00000005160
N
0.880
LARP4
Sus scrofa
ENSSSCG00000000219
N
0.846
LARP4
Gorilla gorilla
ENSGGOG00000015230
N
0.815
LARP4
Choloepus hoffmanni
ENSCHOG00000010490
N
0.810
ENSCPOG00000025978
Cavia porcellus
ENSCPOG00000025978
N
0.780
LARP4
Ochotona princeps
ENSOPRG00000004592
N
0.776
LARP4
Tupaia belangeri
ENSTBEG00000005167
N
0.776
LARP4B
Macropus eugenii
ENSMEUG00000013114
N
0.776
LARP4
Sorex araneus
ENSSARG00000012469
N
0.759
LARP4
Canis familiaris
ENSCAFG00000008174
N
0.759
Ame_R010643
Ailuropoda melanoleuca
Ame_R010643
N
0.759
LARP4
Homo sapiens
ENSG00000161813
N
0.759
LARP4
Tarsius syrichta
ENSTSYG00000004342
N
0.759
LARP4
Pteropus vampyrus
ENSPVAG00000016840
N
0.759
LARP4
Tursiops truncatus
ENSTTRG00000003764
N
0.759
ENSPPYG00000004512
Pongo pygmaeus
ENSPPYG00000004512
N
0.759
LARP4
Callithrix jacchus
ENSCJAG00000021131
N
0.759
LARP4
Monodelphis domestica
ENSMODG00000004844
N
0.759
XR_019868.1
Pan troglodytes
ENSPTRG00000004935
N
0.759
LARP4
Dasypus novemcinctus
ENSDNOG00000018540
N
0.759
LOC693337
Macaca mulatta
ENSMMUG00000008172
N
0.759
LARP4
Equus caballus
ENSECAG00000012479
N
0.759
A7MB26_BOVIN
Bos taurus
ENSBTAG00000017164
N
0.741
ENSCPOG00000020519
Cavia porcellus
ENSCPOG00000020519
N
0.741
LARP4
Procavia capensis
ENSPCAG00000003671
N
0.741
LARP4
Ornithorhynchus anatinus
ENSOANG00000004373
N
0.741
ENSOCUG00000021417
Oryctolagus cuniculus
ENSOCUG00000021417
N
0.741
ENSOCUG00000026872
Oryctolagus cuniculus
ENSOCUG00000026872
N
0.741
LARP4
Myotis lucifugus
ENSMLUG00000012513
N
0.724
Larp4
Mus musculus
ENSMUSG00000023025
N
0.724
LOC683071
Rattus norvegicus
ENSRNOG00000042017
N
0.724