CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSOCUG00000021417
(
Oryctolagus cuniculus
)
La
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF05383 (La)
IPR006630
ENSOCUG00000021417
T22810_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOCUP00000016707
La
123
180
LRKQLEFCFSRENLSKDLYLISQMDSDQFVPIWTVANMEEIKKLTTDPDLILEVLRAS
Links
Other
La
family RBPs
Other
Oryctolagus cuniculus
RBPs
84 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSOCUG00000026872
Oryctolagus cuniculus
ENSOCUG00000026872
N
1.000
ENSCPOG00000020519
Cavia porcellus
ENSCPOG00000020519
N
0.966
LARP4
Ochotona princeps
ENSOPRG00000004592
N
0.966
A7MB26_BOVIN
Bos taurus
ENSBTAG00000017164
N
0.966
LARP4
Pteropus vampyrus
ENSPVAG00000016840
N
0.948
LARP4
Loxodonta africana
ENSLAFG00000005160
N
0.948
LARP4
Tursiops truncatus
ENSTTRG00000003764
N
0.948
LARP4
Callithrix jacchus
ENSCJAG00000021131
N
0.948
LARP4
Tupaia belangeri
ENSTBEG00000005167
N
0.948
LARP4
Tarsius syrichta
ENSTSYG00000004342
N
0.948
Ame_R010643
Ailuropoda melanoleuca
Ame_R010643
N
0.948
XR_019868.1
Pan troglodytes
ENSPTRG00000004935
N
0.948
LARP4
Equus caballus
ENSECAG00000012479
N
0.948
LARP4
Canis familiaris
ENSCAFG00000008174
N
0.948
ENSPPYG00000004512
Pongo pygmaeus
ENSPPYG00000004512
N
0.948
LARP4
Homo sapiens
ENSG00000161813
N
0.948
LARP4
Gorilla gorilla
ENSGGOG00000015230
N
0.948
LARP4
Ornithorhynchus anatinus
ENSOANG00000004373
N
0.931
LOC693337
Macaca mulatta
ENSMMUG00000008172
N
0.931
LARP4
Procavia capensis
ENSPCAG00000003671
N
0.931
LARP4
Dasypus novemcinctus
ENSDNOG00000018540
N
0.931
LOC683071
Rattus norvegicus
ENSRNOG00000042017
N
0.931
Larp4
Mus musculus
ENSMUSG00000023025
N
0.931
LARP4
Myotis lucifugus
ENSMLUG00000012513
N
0.914
LARP4
Monodelphis domestica
ENSMODG00000004844
N
0.914
LARP4
Taeniopygia guttata
ENSTGUG00000003479
N
0.914
LARP4
Sorex araneus
ENSSARG00000012469
N
0.914
LARP4
Meleagris gallopavo
ENSMGAG00000010598
N
0.897
Q5F449_CHICK
Gallus gallus
ENSGALG00000006163
N
0.897
LARP4
Choloepus hoffmanni
ENSCHOG00000010490
N
0.897
AAI24888
Xenopus laevis
AAI24888
N
0.879
LARP4
Danio rerio
ENSDARG00000074979
N
0.879
AAI30197
Xenopus laevis
AAI30197
N
0.862
LARP4
Tetraodon nigroviridis
ENSTNIG00000014571
N
0.862
LARP4
Anolis carolinensis
ENSACAG00000017133
N
0.845
LARP4
Gasterosteus aculeatus
ENSGACG00000000680
N
0.845
ENSPPYG00000006330
Pongo pygmaeus
ENSPPYG00000006330
N
0.845
larp4
Xenopus tropicalis
ENSXETG00000007283
N
0.845
LARP4
Vicugna pacos
ENSVPAG00000010136
N
0.845
LARP4
Takifugu rubripes
ENSTRUG00000007206
N
0.845
larp4a
Danio rerio
ENSDARG00000078401
N
0.845
LARP4
Tetraodon nigroviridis
ENSTNIG00000015109
N
0.828
LARP4
Oryzias latipes
ENSORLG00000006758
N
0.810
LARP4
Gasterosteus aculeatus
ENSGACG00000008381
N
0.810
LARP4
Sus scrofa
ENSSSCG00000000219
N
0.810
LARP4
Takifugu rubripes
ENSTRUG00000015939
N
0.810
LARP4
Microcebus murinus
ENSMICG00000012388
N
0.793
LARP4
Oryzias latipes
ENSORLG00000018835
N
0.793
ENSRNOG00000032588
Rattus norvegicus
ENSRNOG00000032588
N
0.776
LARP4
Erinaceus europaeus
ENSEEUG00000000316
N
0.776
LARP4
Otolemur garnettii
ENSOGAG00000001415
N
0.776
Larp4
Dipodomys ordii
ENSDORG00000004013
N
0.741
ENSCPOG00000025978
Cavia porcellus
ENSCPOG00000025978
N
0.741
LARP4
Echinops telfairi
ENSETEG00000011683
N
0.741
LARP4B
Homo sapiens
ENSG00000107929
N
0.724
LARP4B
Monodelphis domestica
ENSMODG00000005957
N
0.724
LARP4B
Myotis lucifugus
ENSMLUG00000005880
N
0.724
LARP4B
Macaca mulatta
ENSMMUG00000005279
N
0.724
LARP4B
Loxodonta africana
ENSLAFG00000015334
N
0.724
Larp4b
Mus musculus
ENSMUSG00000033499
N
0.724
LARP4B
Bos taurus
ENSBTAG00000013899
N
0.724
LARP4B
Sorex araneus
ENSSARG00000001243
N
0.724
LARP4B
Sus scrofa
ENSSSCG00000011162
N
0.724
LARP4B
Tarsius syrichta
ENSTSYG00000002568
N
0.724
Larp5
Rattus norvegicus
ENSRNOG00000015888
N
0.724
LARP4B
Pan troglodytes
ENSPTRG00000002235
N
0.724
LARP4B
Ochotona princeps
ENSOPRG00000003300
N
0.724
ENSPPYG00000002035
Pongo pygmaeus
ENSPPYG00000002035
N
0.724
LARP4B
Echinops telfairi
ENSETEG00000011249
N
0.724
LARP4B
Tursiops truncatus
ENSTTRG00000011151
N
0.724
LARP4B
Dasypus novemcinctus
ENSDNOG00000002462
N
0.724
LOC100057616
Equus caballus
ENSECAG00000024040
N
0.724
LARP4B
Choloepus hoffmanni
ENSCHOG00000007831
N
0.724
LARP4B
Erinaceus europaeus
ENSEEUG00000008391
N
0.724
LARP4B
Gorilla gorilla
ENSGGOG00000003572
N
0.712
LARP4B
Cavia porcellus
ENSCPOG00000009375
N
0.712
LARP4B
Oryctolagus cuniculus
ENSOCUG00000004950
N
0.712
LARP5
Gallus gallus
ENSGALG00000006672
N
0.707
LARP4B
Spermophilus tridecemlineatus
ENSSTOG00000000587
N
0.707
LARP4B
Meleagris gallopavo
ENSMGAG00000005472
N
0.707
LARP4B
Anolis carolinensis
ENSACAG00000002858
N
0.707
ENSTGUG00000013982
Taeniopygia guttata
ENSTGUG00000013982
N
0.707
LARP5
Taeniopygia guttata
ENSTGUG00000000811
N
0.707
PHUM582400
Pediculus humanus
PHUM582400
N
0.707