CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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LARP4
(
Pteropus vampyrus
)
La
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF05383 (La)
IPR006630
ENSPVAG00000016840
T22840_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPVAP00000015885
La
128
185
LKKQLEFCFSRENLSKDLYLISQMDSDQFIPIWTVANMEEIKKLTTDPDLILEVLRSS
Links
Other
La
family RBPs
Other
Pteropus vampyrus
RBPs
88 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
LARP4
Callithrix jacchus
ENSCJAG00000021131
N
1.000
LARP4
Equus caballus
ENSECAG00000012479
N
1.000
LARP4
Canis familiaris
ENSCAFG00000008174
N
1.000
Ame_R010643
Ailuropoda melanoleuca
Ame_R010643
N
1.000
LARP4
Tursiops truncatus
ENSTTRG00000003764
N
1.000
LARP4
Tarsius syrichta
ENSTSYG00000004342
N
1.000
LARP4
Homo sapiens
ENSG00000161813
N
1.000
ENSPPYG00000004512
Pongo pygmaeus
ENSPPYG00000004512
N
1.000
LARP4
Gorilla gorilla
ENSGGOG00000015230
N
1.000
XR_019868.1
Pan troglodytes
ENSPTRG00000004935
N
1.000
LARP4
Loxodonta africana
ENSLAFG00000005160
N
1.000
A7MB26_BOVIN
Bos taurus
ENSBTAG00000017164
N
0.983
LOC693337
Macaca mulatta
ENSMMUG00000008172
N
0.983
ENSCPOG00000020519
Cavia porcellus
ENSCPOG00000020519
N
0.983
LARP4
Procavia capensis
ENSPCAG00000003671
N
0.983
LARP4
Dasypus novemcinctus
ENSDNOG00000018540
N
0.983
LARP4
Sorex araneus
ENSSARG00000012469
N
0.966
LARP4
Myotis lucifugus
ENSMLUG00000012513
N
0.966
LARP4
Monodelphis domestica
ENSMODG00000004844
N
0.966
LARP4
Ornithorhynchus anatinus
ENSOANG00000004373
N
0.948
ENSOCUG00000021417
Oryctolagus cuniculus
ENSOCUG00000021417
N
0.948
LARP4
Tupaia belangeri
ENSTBEG00000005167
N
0.948
ENSOCUG00000026872
Oryctolagus cuniculus
ENSOCUG00000026872
N
0.948
LOC683071
Rattus norvegicus
ENSRNOG00000042017
N
0.948
Larp4
Mus musculus
ENSMUSG00000023025
N
0.948
LARP4
Ochotona princeps
ENSOPRG00000004592
N
0.931
LARP4
Choloepus hoffmanni
ENSCHOG00000010490
N
0.931
LARP4
Vicugna pacos
ENSVPAG00000010136
N
0.897
LARP4
Anolis carolinensis
ENSACAG00000017133
N
0.897
LARP4
Taeniopygia guttata
ENSTGUG00000003479
N
0.897
ENSPPYG00000006330
Pongo pygmaeus
ENSPPYG00000006330
N
0.897
AAI24888
Xenopus laevis
AAI24888
N
0.897
LARP4
Meleagris gallopavo
ENSMGAG00000010598
N
0.879
AAI30197
Xenopus laevis
AAI30197
N
0.879
Q5F449_CHICK
Gallus gallus
ENSGALG00000006163
N
0.879
larp4
Xenopus tropicalis
ENSXETG00000007283
N
0.862
LARP4
Danio rerio
ENSDARG00000074979
N
0.862
larp4a
Danio rerio
ENSDARG00000078401
N
0.862
LARP4
Sus scrofa
ENSSSCG00000000219
N
0.845
LARP4
Tetraodon nigroviridis
ENSTNIG00000014571
N
0.845
LARP4
Gasterosteus aculeatus
ENSGACG00000000680
N
0.828
LARP4
Takifugu rubripes
ENSTRUG00000015939
N
0.828
LARP4
Takifugu rubripes
ENSTRUG00000007206
N
0.828
LARP4
Gasterosteus aculeatus
ENSGACG00000008381
N
0.828
LARP4
Oryzias latipes
ENSORLG00000006758
N
0.828
LARP4
Erinaceus europaeus
ENSEEUG00000000316
N
0.810
LARP4
Otolemur garnettii
ENSOGAG00000001415
N
0.810
LARP4
Tetraodon nigroviridis
ENSTNIG00000015109
N
0.810
LARP4
Microcebus murinus
ENSMICG00000012388
N
0.793
ENSRNOG00000032588
Rattus norvegicus
ENSRNOG00000032588
N
0.793
LARP4
Echinops telfairi
ENSETEG00000011683
N
0.776
LARP4
Oryzias latipes
ENSORLG00000018835
N
0.776
Larp4
Dipodomys ordii
ENSDORG00000004013
N
0.759
LARP4B
Pan troglodytes
ENSPTRG00000002235
N
0.741
LARP4B
Myotis lucifugus
ENSMLUG00000005880
N
0.741
LARP4B
Macaca mulatta
ENSMMUG00000005279
N
0.741
LARP4B
Sorex araneus
ENSSARG00000001243
N
0.741
LARP4B
Monodelphis domestica
ENSMODG00000005957
N
0.741
LARP4B
Ochotona princeps
ENSOPRG00000003300
N
0.741
Larp4b
Mus musculus
ENSMUSG00000033499
N
0.741
ENSPPYG00000002035
Pongo pygmaeus
ENSPPYG00000002035
N
0.741
LARP4B
Homo sapiens
ENSG00000107929
N
0.741
LARP4B
Echinops telfairi
ENSETEG00000011249
N
0.741
LARP4B
Erinaceus europaeus
ENSEEUG00000008391
N
0.741
LOC100057616
Equus caballus
ENSECAG00000024040
N
0.741
Larp5
Rattus norvegicus
ENSRNOG00000015888
N
0.741
LARP4B
Tarsius syrichta
ENSTSYG00000002568
N
0.741
LARP4B
Dasypus novemcinctus
ENSDNOG00000002462
N
0.741
LARP4B
Loxodonta africana
ENSLAFG00000015334
N
0.741
LARP4B
Sus scrofa
ENSSSCG00000011162
N
0.741
LARP4B
Tursiops truncatus
ENSTTRG00000011151
N
0.741
LARP4B
Bos taurus
ENSBTAG00000013899
N
0.741
ENSCPOG00000025978
Cavia porcellus
ENSCPOG00000025978
N
0.741
LARP4B
Cavia porcellus
ENSCPOG00000009375
N
0.729
LARP4B
Oryctolagus cuniculus
ENSOCUG00000004950
N
0.729
LARP4B
Gorilla gorilla
ENSGGOG00000003572
N
0.729
LARP4B
Meleagris gallopavo
ENSMGAG00000005472
N
0.724
LARP5
Gallus gallus
ENSGALG00000006672
N
0.724
LARP4B
Anolis carolinensis
ENSACAG00000002858
N
0.724
ENSTGUG00000013982
Taeniopygia guttata
ENSTGUG00000013982
N
0.724
LARP4B
Choloepus hoffmanni
ENSCHOG00000007831
N
0.724
LARP5
Taeniopygia guttata
ENSTGUG00000000811
N
0.724
LARP4B
Spermophilus tridecemlineatus
ENSSTOG00000000587
N
0.724
LARP4B
Ornithorhynchus anatinus
ENSOANG00000006100
N
0.712
LARP4B
Vicugna pacos
ENSVPAG00000000128
N
0.707
LARP4B
Canis familiaris
ENSCAFG00000005546
N
0.707
Ame_R012731
Ailuropoda melanoleuca
Ame_R012731
N
0.707
larp4b
Xenopus tropicalis
ENSXETG00000016882
N
0.707