CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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LARP4
(
Choloepus hoffmanni
)
La
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF05383 (La)
IPR006630
ENSCHOG00000010490
T22698_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCHOP00000009289
La
123
180
LKKQIEFCFSRENLSKDLYLISQMDSDQFIPIWTVANMEEIKKLTTDLDLILEVLRXX
Links
Other
La
family RBPs
Other
Choloepus hoffmanni
RBPs
75 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
LARP4
Dasypus novemcinctus
ENSDNOG00000018540
N
0.948
LARP4
Tupaia belangeri
ENSTBEG00000005167
N
0.948
LARP4
Pteropus vampyrus
ENSPVAG00000016840
N
0.931
LOC693337
Macaca mulatta
ENSMMUG00000008172
N
0.931
LARP4
Tursiops truncatus
ENSTTRG00000003764
N
0.931
LARP4
Gorilla gorilla
ENSGGOG00000015230
N
0.931
LARP4
Loxodonta africana
ENSLAFG00000005160
N
0.931
LARP4
Monodelphis domestica
ENSMODG00000004844
N
0.931
LARP4
Ochotona princeps
ENSOPRG00000004592
N
0.931
XR_019868.1
Pan troglodytes
ENSPTRG00000004935
N
0.931
ENSPPYG00000004512
Pongo pygmaeus
ENSPPYG00000004512
N
0.931
LARP4
Sorex araneus
ENSSARG00000012469
N
0.931
LARP4
Callithrix jacchus
ENSCJAG00000021131
N
0.931
LARP4
Homo sapiens
ENSG00000161813
N
0.931
LARP4
Tarsius syrichta
ENSTSYG00000004342
N
0.931
LARP4
Equus caballus
ENSECAG00000012479
N
0.931
LARP4
Canis familiaris
ENSCAFG00000008174
N
0.931
Ame_R010643
Ailuropoda melanoleuca
Ame_R010643
N
0.931
LARP4
Ornithorhynchus anatinus
ENSOANG00000004373
N
0.914
LARP4
Procavia capensis
ENSPCAG00000003671
N
0.914
ENSCPOG00000020519
Cavia porcellus
ENSCPOG00000020519
N
0.914
A7MB26_BOVIN
Bos taurus
ENSBTAG00000017164
N
0.914
ENSOCUG00000021417
Oryctolagus cuniculus
ENSOCUG00000021417
N
0.897
ENSOCUG00000026872
Oryctolagus cuniculus
ENSOCUG00000026872
N
0.897
Larp4
Mus musculus
ENSMUSG00000023025
N
0.897
LARP4
Myotis lucifugus
ENSMLUG00000012513
N
0.897
LOC683071
Rattus norvegicus
ENSRNOG00000042017
N
0.879
AAI24888
Xenopus laevis
AAI24888
N
0.862
LARP4
Anolis carolinensis
ENSACAG00000017133
N
0.845
ENSPPYG00000006330
Pongo pygmaeus
ENSPPYG00000006330
N
0.845
AAI30197
Xenopus laevis
AAI30197
N
0.845
LARP4
Taeniopygia guttata
ENSTGUG00000003479
N
0.845
Q5F449_CHICK
Gallus gallus
ENSGALG00000006163
N
0.828
larp4
Xenopus tropicalis
ENSXETG00000007283
N
0.828
LARP4
Vicugna pacos
ENSVPAG00000010136
N
0.828
LARP4
Danio rerio
ENSDARG00000074979
N
0.828
LARP4
Meleagris gallopavo
ENSMGAG00000010598
N
0.828
larp4a
Danio rerio
ENSDARG00000078401
N
0.810
Larp4
Dipodomys ordii
ENSDORG00000004013
N
0.810
LARP4
Gasterosteus aculeatus
ENSGACG00000000680
N
0.810
LARP4
Tetraodon nigroviridis
ENSTNIG00000014571
N
0.810
LARP4
Takifugu rubripes
ENSTRUG00000007206
N
0.793
LARP4
Sus scrofa
ENSSSCG00000000219
N
0.793
ENSRNOG00000032588
Rattus norvegicus
ENSRNOG00000032588
N
0.776
LARP4
Takifugu rubripes
ENSTRUG00000015939
N
0.776
LARP4
Oryzias latipes
ENSORLG00000006758
N
0.776
LARP4
Gasterosteus aculeatus
ENSGACG00000008381
N
0.776
LARP4
Tetraodon nigroviridis
ENSTNIG00000015109
N
0.759
LARP4
Echinops telfairi
ENSETEG00000011683
N
0.759
LARP4
Erinaceus europaeus
ENSEEUG00000000316
N
0.759
LARP4
Otolemur garnettii
ENSOGAG00000001415
N
0.759
LARP4B
Choloepus hoffmanni
ENSCHOG00000007831
N
0.741
LARP4
Microcebus murinus
ENSMICG00000012388
N
0.741
LARP4
Oryzias latipes
ENSORLG00000018835
N
0.741
LARP4B
Myotis lucifugus
ENSMLUG00000005880
N
0.724
LARP4B
Monodelphis domestica
ENSMODG00000005957
N
0.724
LARP4B
Bos taurus
ENSBTAG00000013899
N
0.707
LARP4B
Homo sapiens
ENSG00000107929
N
0.707
LARP4B
Anolis carolinensis
ENSACAG00000002858
N
0.707
LOC100057616
Equus caballus
ENSECAG00000024040
N
0.707
LARP4B
Dasypus novemcinctus
ENSDNOG00000002462
N
0.707
LARP4B
Echinops telfairi
ENSETEG00000011249
N
0.707
LARP4B
Erinaceus europaeus
ENSEEUG00000008391
N
0.707
LARP4B
Tarsius syrichta
ENSTSYG00000002568
N
0.707
LARP4B
Sorex araneus
ENSSARG00000001243
N
0.707
ENSPPYG00000002035
Pongo pygmaeus
ENSPPYG00000002035
N
0.707
LARP4B
Pan troglodytes
ENSPTRG00000002235
N
0.707
Larp5
Rattus norvegicus
ENSRNOG00000015888
N
0.707
LARP4B
Ochotona princeps
ENSOPRG00000003300
N
0.707
LARP4B
Sus scrofa
ENSSSCG00000011162
N
0.707
LARP4B
Loxodonta africana
ENSLAFG00000015334
N
0.707
LARP4B
Pteropus vampyrus
ENSPVAG00000009784
N
0.707
LARP4B
Macaca mulatta
ENSMMUG00000005279
N
0.707
Larp4b
Mus musculus
ENSMUSG00000033499
N
0.707
LARP4B
Tursiops truncatus
ENSTTRG00000011151
N
0.707