CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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How to cite
GH15776
(
Drosophila grimshawi
)
La
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF05383 (La)
IPR006630
FBgn0123247
T22904_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0149682
La
295
352
LATQLDYYFCRENLATDTYLVSQMDSDQYVLIKTVANFNLVKKLTKDINLITDVLRES
Links
Other
La
family RBPs
Other
Drosophila grimshawi
RBPs
18 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
GJ15458
Drosophila virilis
FBgn0202651
N
0.983
GI12555
Drosophila mojavensis
FBgn0135312
N
0.948
GK17513
Drosophila willistoni
FBgn0219512
N
0.862
AAEL010841
Aedes aegypti
AAEL010841
N
0.828
CG11505
Drosophila melanogaster
FBgn0035424
N
0.828
GG15116
Drosophila erecta
FBgn0107369
N
0.828
GM14551
Drosophila sechellia
FBgn0169472
N
0.828
GE21342
Drosophila yakuba
FBgn0238604
N
0.828
GF10124
Drosophila ananassae
FBgn0087165
N
0.810
AGAP006460
Anopheles gambiae
AGAP006460
N
0.793
GA11040-RA
Drosophila pseudoobscura
FBgn0071096
N
0.793
amel4_ncbi_hmm25495
Apis mellifera
amel4_ncbi_hmm25495
N
0.793
DGIL_AUG5s5549g4t1
Acyrtosiphon pisum
DGIL_AUG5s5549g4t1
N
0.776
PHUM582400
Pediculus humanus
PHUM582400
N
0.759
e_gw1.29.70.1
Daphnia pulex
e_gw1.29.70.1
N
0.759
nasonia_NCBI_hmm376894
Nasonia vitripennis
nasonia_NCBI_hmm376894
N
0.759
XP_798222.2
Strongylocentrotus purpuratus
XP_798222.2
N
0.707
XP_001184765.1
Strongylocentrotus purpuratus
XP_001184765.1
N
0.707