CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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XP_001184765.1
(
Strongylocentrotus purpuratus
)
La
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF05383 (La)
IPR006630
XP_001184765.1
T23204_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
XP_001184765.1
La
146
203
LQRQLEYYFSRENLANDRYLQSQMDSDQYVTIRTIANFNAVKKLTHDLQLVIEVLRES
Links
Other
La
family RBPs
Other
Strongylocentrotus purpuratus
RBPs
23 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
XP_798222.2
Strongylocentrotus purpuratus
XP_798222.2
N
1.000
XP_001200300.1
Strongylocentrotus purpuratus
XP_001200300.1
N
0.983
XP_001178699.1
Strongylocentrotus purpuratus
XP_001178699.1
N
0.983
AGAP006460
Anopheles gambiae
AGAP006460
N
0.759
GK17513
Drosophila willistoni
FBgn0219512
N
0.759
PHUM582400
Pediculus humanus
PHUM582400
N
0.759
GF10124
Drosophila ananassae
FBgn0087165
N
0.759
nasonia_NCBI_hmm376894
Nasonia vitripennis
nasonia_NCBI_hmm376894
N
0.759
DGIL_AUG5s5549g4t1
Acyrtosiphon pisum
DGIL_AUG5s5549g4t1
N
0.759
amel4_ncbi_hmm25495
Apis mellifera
amel4_ncbi_hmm25495
N
0.759
GE21342
Drosophila yakuba
FBgn0238604
N
0.741
GM14551
Drosophila sechellia
FBgn0169472
N
0.741
GI12555
Drosophila mojavensis
FBgn0135312
N
0.741
CG11505
Drosophila melanogaster
FBgn0035424
N
0.741
GG15116
Drosophila erecta
FBgn0107369
N
0.741
AAEL010841
Aedes aegypti
AAEL010841
N
0.741
e_gw1.29.70.1
Daphnia pulex
e_gw1.29.70.1
N
0.724
GJ15458
Drosophila virilis
FBgn0202651
N
0.724
GA11040-RA
Drosophila pseudoobscura
FBgn0071096
N
0.724
fgenesh2_pg.scaffold_154000069
Branchiostoma floridae
fgenesh2_pg.scaffold_154000069
N
0.724
ENSCING00000015692
Ciona intestinalis
ENSCING00000015692
N
0.707
ENSCING00000008328
Ciona intestinalis
ENSCING00000008328
N
0.707
GH15776
Drosophila grimshawi
FBgn0123247
N
0.707