CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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LARP7
(
Tursiops truncatus
)
La,RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF05383 (La)
PF00076 (RRM_1)
IPR006630
IPR000504
ENSTTRG00000005233
T23449_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTTRP00000004937
La
1
39
REQIESRDGYVDISLLVSFNKMKKLTTDGKLIARALKNS
ENSTTRP00000004937
RRM
69
132
VYVELLPKNVNHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIEFLNNPP
Links
Other
La,RRM
family RBPs
Other
Tursiops truncatus
RBPs
20 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSGGOG00000006438
Gorilla gorilla
ENSGGOG00000006438
N
0.883
LARP7
Vicugna pacos
ENSVPAG00000010502
N
0.806
LARP7
Tupaia belangeri
ENSTBEG00000009188
N
0.806
ENSDORG00000008896
Dipodomys ordii
ENSDORG00000008896
N
0.806
LARP7
Equus caballus
ENSECAG00000000834
N
0.806
Q0P5K0_BOVIN
Bos taurus
ENSBTAG00000009632
N
0.806
LARP7
Tarsius syrichta
ENSTSYG00000006769
N
0.806
LARP7
Otolemur garnettii
ENSOGAG00000001643
N
0.805
ENSGGOG00000023567
Gorilla gorilla
ENSGGOG00000023567
N
0.798
LARP7
Homo sapiens
ENSG00000174720
N
0.798
LARP7
Sus scrofa
ENSSSCG00000009119
N
0.798
LARP7
Pan troglodytes
ENSPTRG00000016380
N
0.798
LARP7
Callithrix jacchus
ENSCJAG00000003711
N
0.798
LARP7
Erinaceus europaeus
ENSEEUG00000012824
N
0.790
LARP7
Oryctolagus cuniculus
ENSOCUG00000007073
N
0.790
LARP7
Dasypus novemcinctus
ENSDNOG00000013761
N
0.782
Q5ZIT4_CHICK
Gallus gallus
ENSGALG00000012048
N
0.774
LARP7
Pteropus vampyrus
ENSPVAG00000000282
N
0.774
LARP7
Anolis carolinensis
ENSACAG00000010662
N
0.750
LARP7
Ornithorhynchus anatinus
ENSOANG00000009298
N
0.730