CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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LARP7
(
Otolemur garnettii
)
La,RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF05383 (La)
PF00076 (RRM_1)
IPR006630
IPR000504
ENSOGAG00000001643
T23415_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOGAP00000001467
La
36
94
IAKVDFWFGDANLHKERFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALKSS
ENSOGAP00000001467
RRM
124
187
VYVELLPKNVNHSWIERVFGKCGNVVYVSIPHYKSTGDPKGFAFVEFETKEQAAKAIEFLNNPP
Links
Other
La,RRM
family RBPs
Other
Otolemur garnettii
RBPs
26 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
LARP7
Equus caballus
ENSECAG00000000834
N
0.952
Q0P5K0_BOVIN
Bos taurus
ENSBTAG00000009632
N
0.952
LARP7
Vicugna pacos
ENSVPAG00000010502
N
0.952
LARP7
Oryctolagus cuniculus
ENSOCUG00000007073
N
0.952
LARP7
Tarsius syrichta
ENSTSYG00000006769
N
0.952
ENSDORG00000008896
Dipodomys ordii
ENSDORG00000008896
N
0.944
LARP7
Erinaceus europaeus
ENSEEUG00000012824
N
0.944
ENSGGOG00000023567
Gorilla gorilla
ENSGGOG00000023567
N
0.944
LARP7
Homo sapiens
ENSG00000174720
N
0.944
LARP7
Callithrix jacchus
ENSCJAG00000003711
N
0.944
LARP7
Pan troglodytes
ENSPTRG00000016380
N
0.944
LARP7
Sus scrofa
ENSSSCG00000009119
N
0.944
LARP7
Tupaia belangeri
ENSTBEG00000009188
N
0.944
LARP7
Pteropus vampyrus
ENSPVAG00000000282
N
0.935
LARP7
Dasypus novemcinctus
ENSDNOG00000013761
N
0.927
Q5ZIT4_CHICK
Gallus gallus
ENSGALG00000012048
N
0.927
LARP7
Anolis carolinensis
ENSACAG00000010662
N
0.903
LARP7
Ornithorhynchus anatinus
ENSOANG00000009298
N
0.873
ENSCJAG00000009340
Callithrix jacchus
ENSCJAG00000009340
N
0.847
LARP7
Tursiops truncatus
ENSTTRG00000005233
N
0.805
ENSCHOG00000008967
Choloepus hoffmanni
ENSCHOG00000008967
N
0.789
LARP7
Oryzias latipes
ENSORLG00000004978
N
0.766
LARP7
Takifugu rubripes
ENSTRUG00000004996
N
0.742
ENSGGOG00000006438
Gorilla gorilla
ENSGGOG00000006438
N
0.740
LARP7
Gasterosteus aculeatus
ENSGACG00000019618
N
0.736
LARP7
Microcebus murinus
ENSMICG00000015160
N
0.702