CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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LARP7
(
Ornithorhynchus anatinus
)
La,RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF05383 (La)
PF00076 (RRM_1)
IPR006630
IPR000504
ENSOANG00000009298
T23411_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOANP00000014795
La
38
97
IAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALKSS
ENSOANP00000014795
RRM
127
190
VYVELLPKDVNHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQADKAIEFLNNPP
ENSOANP00000014795
RRM
480
530
RKHIRDTLAVISNVVYVDMLEGDTECHVRYKTPEDAQAIMKACTEIQKKHN
ENSOANP00000014796
La
38
97
IAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALKSS
ENSOANP00000014796
RRM
127
192
VYVELLPKDVNHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQADKAIEECMQSSVC
ENSOANP00000026590
La
38
97
IAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALKSS
Links
Other
La,RRM
family RBPs
Other
Ornithorhynchus anatinus
RBPs
40 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
LARP7
Homo sapiens
ENSG00000174720
N
0.983
LARP7
Tarsius syrichta
ENSTSYG00000006769
N
0.921
LARP7
Equus caballus
ENSECAG00000000834
N
0.921
LARP7
Vicugna pacos
ENSVPAG00000010502
N
0.921
LARP7
Loxodonta africana
ENSLAFG00000015769
N
0.915
LARP7
Callithrix jacchus
ENSCJAG00000003711
N
0.913
Q0P5K0_BOVIN
Bos taurus
ENSBTAG00000009632
N
0.913
LARP7
Tupaia belangeri
ENSTBEG00000009188
N
0.913
LARP7
Sus scrofa
ENSSSCG00000009119
N
0.913
ENSGGOG00000023567
Gorilla gorilla
ENSGGOG00000023567
N
0.913
ENSDORG00000008896
Dipodomys ordii
ENSDORG00000008896
N
0.913
LARP7
Pan troglodytes
ENSPTRG00000016380
N
0.913
LARP7
Oryctolagus cuniculus
ENSOCUG00000007073
N
0.905
LARP7
Monodelphis domestica
ENSMODG00000005669
N
0.904
ENSCHOG00000002379
Choloepus hoffmanni
ENSCHOG00000002379
N
0.903
Ame_R014598
Ailuropoda melanoleuca
Ame_R014598
N
0.898
LARP7
Canis familiaris
ENSCAFG00000011715
N
0.898
LARP7
Dasypus novemcinctus
ENSDNOG00000013761
N
0.897
LARP7
Erinaceus europaeus
ENSEEUG00000012824
N
0.897
LARP7
Echinops telfairi
ENSETEG00000011692
N
0.892
Q5ZIT4_CHICK
Gallus gallus
ENSGALG00000012048
N
0.889
LARP7
Pteropus vampyrus
ENSPVAG00000000282
N
0.889
ENSPPYG00000015010
Pongo pygmaeus
ENSPPYG00000015010
N
0.886
LARP7
Cavia porcellus
ENSCPOG00000011830
N
0.886
Larp7
Mus musculus
ENSMUSG00000027968
N
0.881
LARP7
Otolemur garnettii
ENSOGAG00000001643
N
0.873
LARP7
Anolis carolinensis
ENSACAG00000010662
N
0.865
LARP7
Taeniopygia guttata
ENSTGUG00000001804
N
0.853
LARP7
Macropus eugenii
ENSMEUG00000004739
N
0.852
LARP7
Meleagris gallopavo
ENSMGAG00000010947
N
0.836
ENSCJAG00000009340
Callithrix jacchus
ENSCJAG00000009340
N
0.817
LARP7
Ochotona princeps
ENSOPRG00000009594
N
0.757
larp7
Xenopus tropicalis
ENSXETG00000024097
N
0.751
LARP7
Oryzias latipes
ENSORLG00000004978
N
0.746
LARP7
Spermophilus tridecemlineatus
ENSSTOG00000011789
N
0.739
ENSCHOG00000008967
Choloepus hoffmanni
ENSCHOG00000008967
N
0.738
LARP7
Tursiops truncatus
ENSTTRG00000005233
N
0.730
LARP7
Macaca mulatta
ENSMMUG00000017911
N
0.716
LARP7
Takifugu rubripes
ENSTRUG00000004996
N
0.714
LARP7
Gasterosteus aculeatus
ENSGACG00000019618
N
0.706