CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
RBCK1
(
Anolis carolinensis
)
RanBP ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
IPR001876
ENSACAG00000008195
T26275_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSACAP00000008064
RanBP ZF
187
215
KVGWECPTCTYLNKPTRPGCEMCCTERPK
Links
Other
RanBP ZF
family RBPs
Other
Anolis carolinensis
RBPs
4 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
rbck1
Danio rerio
ENSDARG00000031954
N
0.759
RBCK1
Oryzias latipes
ENSORLG00000006036
N
0.724
SHARPIN
Anolis carolinensis
ENSACAG00000007245
N
0.724
RBCK1
Dasypus novemcinctus
ENSDNOG00000017407
N
0.700