CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RBCK1
(
Dasypus novemcinctus
)
RanBP ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
IPR001876
ENSDNOG00000017407
T26393_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDNOP00000013489
RanBP ZF
173
201
PRVGWQCPGCTFINKPTRPGCEMCCRARP
Links
Other
RanBP ZF
family RBPs
Other
Dasypus novemcinctus
RBPs
28 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Rbck1
Rattus norvegicus
ENSRNOG00000006695
N
0.897
RBCK1
Pteropus vampyrus
ENSPVAG00000011249
N
0.897
RBCK1
Pan troglodytes
ENSPTRG00000013144
N
0.897
RBCK1
Oryctolagus cuniculus
ENSOCUG00000007636
N
0.897
RBCK1
Tupaia belangeri
ENSTBEG00000013740
N
0.897
RBCK1
Tursiops truncatus
ENSTTRG00000005104
N
0.897
A6ML91_CALJA
Callithrix jacchus
ENSCJAG00000020846
N
0.897
Ame_R013963
Ailuropoda melanoleuca
Ame_R013963
N
0.897
RBCK1
Vicugna pacos
ENSVPAG00000000451
N
0.897
Rbck1
Mus musculus
ENSMUSG00000027466
N
0.897
ENSPPYG00000010868
Pongo pygmaeus
ENSPPYG00000010868
N
0.897
RBCK1
Loxodonta africana
ENSLAFG00000027558
N
0.897
RBCK1
Homo sapiens
ENSG00000125826
N
0.897
RBCK1
Felis catus
ENSFCAG00000003278
N
0.897
RBCK1
Microcebus murinus
ENSMICG00000013495
N
0.897
RBCK1
Gorilla gorilla
ENSGGOG00000008982
N
0.897
RBCK1
Macaca mulatta
ENSMMUG00000012601
N
0.897
RBCK1
Procavia capensis
ENSPCAG00000001109
N
0.862
Q1JPC8_BOVIN
Bos taurus
ENSBTAG00000017002
N
0.862
RBCK1
Erinaceus europaeus
ENSEEUG00000013802
N
0.862
RBCK1
Spermophilus tridecemlineatus
ENSSTOG00000008625
N
0.862
RBCK1
Canis familiaris
ENSCAFG00000006921
N
0.833
RBCK1
Cavia porcellus
ENSCPOG00000005720
N
0.833
RBCK1
Monodelphis domestica
ENSMODG00000019512
N
0.767
ENSMGAG00000007903
Meleagris gallopavo
ENSMGAG00000007903
N
0.724
RBCK1
Anolis carolinensis
ENSACAG00000008195
N
0.700
SHARPIN
Anolis carolinensis
ENSACAG00000007245
N
0.700
SHARPIN
Gallus gallus
ENSGALG00000022341
N
0.700