CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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SHARPIN
(
Anolis carolinensis
)
RanBP ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
IPR001876
ENSACAG00000007245
T26274_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSACAP00000007131
RanBP ZF
185
211
GWPCPTCTFINKPTRPGCEMCSTDRPA
Links
Other
RanBP ZF
family RBPs
Other
Anolis carolinensis
RBPs
49 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSMGAG00000007903
Meleagris gallopavo
ENSMGAG00000007903
N
0.889
SHARPIN
Gallus gallus
ENSGALG00000022341
N
0.857
CU693494.1
Danio rerio
ENSDARG00000076995
N
0.852
SHARPIN
Monodelphis domestica
ENSMODG00000010491
N
0.815
RBCK1
Canis familiaris
ENSCAFG00000006921
N
0.815
SHARPIN
Bos taurus
ENSBTAG00000012235
N
0.815
SHARPIN
Cavia porcellus
ENSCPOG00000013242
N
0.815
LOC100392136
Callithrix jacchus
ENSCJAG00000021452
N
0.815
RBCK1
Macaca mulatta
ENSMMUG00000012601
N
0.778
RBCK1
Loxodonta africana
ENSLAFG00000027558
N
0.778
RBCK1
Microcebus murinus
ENSMICG00000013495
N
0.778
RBCK1
Procavia capensis
ENSPCAG00000001109
N
0.778
RBCK1
Spermophilus tridecemlineatus
ENSSTOG00000008625
N
0.778
Rbck1
Rattus norvegicus
ENSRNOG00000006695
N
0.778
RBCK1
Pteropus vampyrus
ENSPVAG00000011249
N
0.778
RBCK1
Pan troglodytes
ENSPTRG00000013144
N
0.778
RBCK1
Oryctolagus cuniculus
ENSOCUG00000007636
N
0.778
RBCK1
Tupaia belangeri
ENSTBEG00000013740
N
0.778
Rbck1
Mus musculus
ENSMUSG00000027466
N
0.778
SHARPIN
Sus scrofa
ENSSSCG00000005914
N
0.778
ENSGACG00000002544
Gasterosteus aculeatus
ENSGACG00000002544
N
0.778
Ame_R013963
Ailuropoda melanoleuca
Ame_R013963
N
0.778
RBCK1
Vicugna pacos
ENSVPAG00000000451
N
0.778
RBCK1
Cavia porcellus
ENSCPOG00000005720
N
0.778
A6ML91_CALJA
Callithrix jacchus
ENSCJAG00000020846
N
0.778
Q1JPC8_BOVIN
Bos taurus
ENSBTAG00000017002
N
0.778
LOC100065232
Equus caballus
ENSECAG00000001400
N
0.778
RBCK1
Erinaceus europaeus
ENSEEUG00000013802
N
0.778
ENSPPYG00000010868
Pongo pygmaeus
ENSPPYG00000010868
N
0.778
ENSTRUG00000006949
Takifugu rubripes
ENSTRUG00000006949
N
0.778
RBCK1
Tursiops truncatus
ENSTTRG00000005104
N
0.778
RBCK1
Homo sapiens
ENSG00000125826
N
0.778
RBCK1
Felis catus
ENSFCAG00000003278
N
0.778
RBCK1
Gorilla gorilla
ENSGGOG00000008982
N
0.778
SHARPIN
Macaca mulatta
ENSMMUG00000007152
N
0.750
rbck1
Danio rerio
ENSDARG00000031954
N
0.750
ENSORLG00000007392
Oryzias latipes
ENSORLG00000007392
N
0.750
RBCK1
Monodelphis domestica
ENSMODG00000019512
N
0.741
Sharpin
Rattus norvegicus
ENSRNOG00000012812
N
0.741
Sharpin
Mus musculus
ENSMUSG00000022552
N
0.741
RBCK1
Anolis carolinensis
ENSACAG00000008195
N
0.724
SHARPIN
Homo sapiens
ENSG00000179526
N
0.714
SHARPIN
Gorilla gorilla
ENSGGOG00000027471
N
0.714
ENSORLG00000017281
Oryzias latipes
ENSORLG00000017281
N
0.704
e_gw1.9.12.1
Lottia gigantea
e_gw1.9.12.1
N
0.704
ENSTNIG00000008521
Tetraodon nigroviridis
ENSTNIG00000008521
N
0.704
ENSTRUG00000011046
Takifugu rubripes
ENSTRUG00000011046
N
0.704
ENSGACG00000017834
Gasterosteus aculeatus
ENSGACG00000017834
N
0.704
RBCK1
Dasypus novemcinctus
ENSDNOG00000017407
N
0.700