estExt_Genewise1Plus.C_11381 (Myceliophthora thermophila)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 estExt_Genewise1Plus.C_11381 T51357_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
NCU08034
M186_0.6 		Neurospora crassa WGCACA RNAcompete
Ray et al.(2013)
RNCMPT00209 		0.877
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1Plus.C_11381 RRM 10 81
estExt_Genewise1Plus.C_11381 RRM 174 237

Links

Other RRM family RBPs
Other Myceliophthora thermophila RBPs

17 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_Genewise1Plus.C_11424 Thielavia terrestris estExt_Genewise1Plus.C_11424 I 0.934
CHGG_04587 Chaetomium globosum CHGG_04587 I 0.934
Pa_6_2170 Podospora anserina Pa_6_2170 I 0.891
scaffold_15-snap.81.1 Neurospora tetrasperma scaffold_15-snap.81.1 I 0.877
NCU08034 Neurospora crassa NCU08034 D 0.877
GLRG_08280 Colletotrichum graminicola GLRG_08280 I 0.788
e_gw1.3.979.1 Cryphonectria parasitica e_gw1.3.979.1 I 0.784
estExt_fgenesh1_pg.C_sca_20_chr6_4_00002 Nectria haematococca estExt_fgenesh1_pg.C_sca_20_chr6_4_00002 I 0.775
MGG_07085 Magnaporthe oryzae MGG_07085 I 0.750
estExt_fgenesh5_pg.C_20604 Trichoderma reesei estExt_fgenesh5_pg.C_20604 I 0.746
fgenesh1_pg.C_scaffold_8000502 Trichoderma virens fgenesh1_pg.C_scaffold_8000502 I 0.739
BDBG_07806 Blastomyces dermatitidis BDBG_07806 I 0.730
VDAG_10424 Verticillium dahliae VDAG_10424 I 0.715
HCAG_02639 Histoplasma capsulatum HCAG_02639 N 0.715
FVEG_10477 Fusarium verticillioides FVEG_10477 N 0.710
PABG_04932 Paracoccidioides brasiliensis PABG_04932 N 0.708
NFIA_075370 Neosartorya fischeri CADNFIAG00007887 N 0.701