SS1G_12129 (Sclerotinia sclerotiorum)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 SS1G_12129 T31000_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
SS1T_12129 RRM 43 113

Links

Other RRM family RBPs
Other Sclerotinia sclerotiorum RBPs

46 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BC1G_11068 Botrytis cinerea BC1G_11068 N 0.986
gw1.3.1887.1 Trichoderma virens gw1.3.1887.1 N 0.873
gw1.23.298.1 Trichoderma reesei gw1.23.298.1 N 0.859
estExt_Genewise1Plus.C_110234 Trichoderma atroviride estExt_Genewise1Plus.C_110234 N 0.845
MGG_03740 Magnaporthe oryzae MGG_03740 N 0.831
estExt_Genewise1.C_70784 Neurospora discreta estExt_Genewise1.C_70784 N 0.817
estExt_Genewise1Plus.C_50393 Neurospora tetrasperma estExt_Genewise1Plus.C_50393 N 0.817
fgenesh1_pg.sca_1_chr1_3_0001239 Nectria haematococca fgenesh1_pg.sca_1_chr1_3_0001239 N 0.817
NCU03226 Neurospora crassa NCU03226 N 0.817
FGSG_04914 Fusarium graminearum FGSG_04914 N 0.803
e_gw1.4.2145.1 Cryphonectria parasitica e_gw1.4.2145.1 N 0.803
estExt_fgenesh1_pg.C_20037 Myceliophthora thermophila estExt_fgenesh1_pg.C_20037 N 0.789
GLRG_00505 Colletotrichum graminicola GLRG_00505 N 0.789
FVEG_03573 Fusarium verticillioides FVEG_03573 N 0.789
FOXG_05707 Fusarium oxysporum FOXG_05707 N 0.789
estExt_fgenesh2_kg.C_60460 Agaricus bisporus estExt_fgenesh2_kg.C_60460 I 0.775
Pa_1_1890 Podospora anserina Pa_1_1890 N 0.775
fgenesh1_pm.C_scaffold_6000172 Pleurotus ostreatus fgenesh1_pm.C_scaffold_6000172 I 0.761
gww1.22.130.1 Laccaria bicolor gww1.22.130.1 I 0.761
estExt_fgenesh2_kg.C_40317 Thielavia terrestris estExt_fgenesh2_kg.C_40317 N 0.761
CHGG_01938 Chaetomium globosum CHGG_01938 N 0.761
estExt_fgenesh2_kg.C_130331 Serpula lacrymans estExt_fgenesh2_kg.C_130331 I 0.761
SNOG_00429 Stagonospora nodorum SNOG_00429 N 0.746
GSTUMT00004748001 Tuber melanosporum GSTUMT00004748001 N 0.746
AB00849.1 Alternaria brassicicola AB00849.1 N 0.746
e_gw1.6.577.1 Heterobasidion annosum e_gw1.6.577.1 N 0.746
estExt_fgenesh1_kg.C_130003 Mycosphaerella fijiensis estExt_fgenesh1_kg.C_130003 N 0.746
estExt_fgenesh1_kg.C_20142 Cochliobolus heterostrophus C5 estExt_fgenesh1_kg.C_20142 N 0.746
estExt_fgenesh1_kg.C_chr_10019 Mycosphaerella graminicola estExt_fgenesh1_kg.C_chr_10019 N 0.746
EAT91924.1 Phaeosphaeria nodorum EAT91924.1 N 0.746
fgenesh1_kg.C_scaffold_4000104 Schizophyllum commune fgenesh1_kg.C_scaffold_4000104 I 0.746
TEQG_00651 Trichophyton equinum TEQG_00651 N 0.732
e_gww2.3.582.1 Phanerochaete chrysosporium e_gww2.3.582.1 N 0.732
TESG_05569 Trichophyton tonsurans TESG_05569 N 0.732
MGYG_02725 Microsporum gypseum MGYG_02725 N 0.732
TERG_06808 Trichophyton rubrum TERG_06808 N 0.732
MCYG_05630 Microsporum canis MCYG_05630 N 0.732
ARB_00312 Arthroderma benhamiae ARB_00312 N 0.732
PTRG_10763 Pyrenophora tritici repentis PTRG_10763 N 0.732
estExt_Genewise1.C_40022 Postia placenta estExt_Genewise1.C_40022 N 0.718
ANIA_04505 Aspergillus nidulans CADANIAG00005939 N 0.718
CIMG_04543 Coccidioides immitis CIMG_04543 N 0.704
PMAA_055960 Penicillium marneffei PMAA_055960 N 0.704
CC1G_08323 Coprinopsis cinerea CC1G_08323 N 0.704
CPSG_06388 Coccidioides posadasii CPSG_06388 N 0.704
ACLA_091280 Aspergillus clavatus CADACLAG00008586 N 0.704