SNOG_08449 (Stagonospora nodorum)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 SNOG_08449 T30618_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
SNOT_08449 RRM 9 68
SNOT_08449 RRM 106 172

Links

Other RRM family RBPs
Other Stagonospora nodorum RBPs

17 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AB02127.1 Alternaria brassicicola AB02127.1 N 0.886
PTRG_11856 Pyrenophora tritici repentis PTRG_11856 N 0.864
estExt_fgenesh1_pm.C_chr_20271 Mycosphaerella graminicola estExt_fgenesh1_pm.C_chr_20271 N 0.752
SS1G_14437 Sclerotinia sclerotiorum SS1G_14437 N 0.750
estExt_Genewise1Plus.C_80545 Mycosphaerella fijiensis estExt_Genewise1Plus.C_80545 N 0.750
BC1G_09648 Botrytis cinerea BC1G_09648 N 0.743
estExt_fgenesh2_kg.C_20245 Neurospora tetrasperma estExt_fgenesh2_kg.C_20245 N 0.733
NCU07069 Neurospora crassa NCU07069 N 0.733
fgenesh2_kg.10__63__CBWT_CBYP_CBYT_CCAH_1370_0_CBYT4195.b1 Trichoderma atroviride fgenesh2_kg.10__63__CBWT_CBYP_CBYT_CCAH_1370_0_CBYT4195.b1 N 0.733
estExt_fgenesh3_kg.C_60024 Neurospora discreta estExt_fgenesh3_kg.C_60024 N 0.733
FVEG_03827 Fusarium verticillioides FVEG_03827 N 0.726
FOXG_05959 Fusarium oxysporum FOXG_05959 N 0.726
estExt_Genewise1.C_21744 Trichoderma virens estExt_Genewise1.C_21744 N 0.726
GLRG_08760 Colletotrichum graminicola GLRG_08760 N 0.711
estExt_Genewise1Plus.C_51423 Myceliophthora thermophila estExt_Genewise1Plus.C_51423 N 0.711
estExt_fgenesh5_pg.C_160051 Trichoderma reesei estExt_fgenesh5_pg.C_160051 N 0.711
VDAG_10099 Verticillium dahliae VDAG_10099 N 0.704