PTRG_11856 (Pyrenophora tritici repentis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 PTRG_11856 T30250_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PTRT_11856 RRM 9 71
PTRT_11856 RRM 102 168

Links

Other RRM family RBPs
Other Pyrenophora tritici repentis RBPs

29 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AB02127.1 Alternaria brassicicola AB02127.1 N 0.970
SNOG_08449 Stagonospora nodorum SNOG_08449 N 0.864
estExt_fgenesh1_pm.C_chr_20271 Mycosphaerella graminicola estExt_fgenesh1_pm.C_chr_20271 N 0.825
estExt_Genewise1Plus.C_80545 Mycosphaerella fijiensis estExt_Genewise1Plus.C_80545 N 0.816
SS1G_14437 Sclerotinia sclerotiorum SS1G_14437 N 0.809
BC1G_09648 Botrytis cinerea BC1G_09648 N 0.801
GLRG_08760 Colletotrichum graminicola GLRG_08760 N 0.797
VDAG_10099 Verticillium dahliae VDAG_10099 N 0.789
CHGG_09128 Chaetomium globosum CHGG_09128 N 0.789
estExt_fgenesh2_kg.C_20245 Neurospora tetrasperma estExt_fgenesh2_kg.C_20245 N 0.785
estExt_fgenesh3_kg.C_60024 Neurospora discreta estExt_fgenesh3_kg.C_60024 N 0.785
NCU07069 Neurospora crassa NCU07069 N 0.785
e_gw1.5.1788.1 Thielavia terrestris e_gw1.5.1788.1 N 0.782
fgenesh2_kg.10__63__CBWT_CBYP_CBYT_CCAH_1370_0_CBYT4195.b1 Trichoderma atroviride fgenesh2_kg.10__63__CBWT_CBYP_CBYT_CCAH_1370_0_CBYT4195.b1 N 0.770
FVEG_03827 Fusarium verticillioides FVEG_03827 N 0.763
FOXG_05959 Fusarium oxysporum FOXG_05959 N 0.763
estExt_Genewise1Plus.C_51423 Myceliophthora thermophila estExt_Genewise1Plus.C_51423 N 0.763
estExt_Genewise1.C_21744 Trichoderma virens estExt_Genewise1.C_21744 N 0.763
e_gw1.18.2147.1 Nectria haematococca e_gw1.18.2147.1 N 0.759
An16g03890 Aspergillus niger CADANGAG00012860 N 0.759
fgenesh1_pm.00168_#_248 Aspergillus carbonarius fgenesh1_pm.00168_#_248 N 0.759
estExt_fgenesh5_pg.C_160051 Trichoderma reesei estExt_fgenesh5_pg.C_160051 N 0.748
ACLA_037960 Aspergillus clavatus CADACLAG00003195 N 0.744
ANIA_04978 Aspergillus nidulans CADANIAG00005417 N 0.741
Pa_4_8210 Podospora anserina Pa_4_8210 N 0.737
estExt_Genewise1.C_90037 Cryphonectria parasitica estExt_Genewise1.C_90037 N 0.737
AO090003000544 Aspergillus oryzae CADAORAG00001164 N 0.729
AFLA_032760 Aspergillus flavus CADAFLAG00002651 N 0.711
Pc13g10700 Penicillium chrysogenum Pc13g10700 N 0.709