estExt_fgenesh1_pm.C_chr_20271 (Mycosphaerella graminicola)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 estExt_fgenesh1_pm.C_chr_20271 T50731_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pm.C_chr_20271 RRM 9 73
estExt_fgenesh1_pm.C_chr_20271 RRM 104 175

Links

Other RRM family RBPs
Other Mycosphaerella graminicola RBPs

29 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_Genewise1Plus.C_80545 Mycosphaerella fijiensis estExt_Genewise1Plus.C_80545 N 0.956
SS1G_14437 Sclerotinia sclerotiorum SS1G_14437 N 0.847
AB02127.1 Alternaria brassicicola AB02127.1 N 0.839
BC1G_09648 Botrytis cinerea BC1G_09648 N 0.839
PTRG_11856 Pyrenophora tritici repentis PTRG_11856 N 0.825
fgenesh2_kg.10__63__CBWT_CBYP_CBYT_CCAH_1370_0_CBYT4195.b1 Trichoderma atroviride fgenesh2_kg.10__63__CBWT_CBYP_CBYT_CCAH_1370_0_CBYT4195.b1 N 0.803
estExt_fgenesh2_kg.C_20245 Neurospora tetrasperma estExt_fgenesh2_kg.C_20245 N 0.788
estExt_fgenesh3_kg.C_60024 Neurospora discreta estExt_fgenesh3_kg.C_60024 N 0.788
NCU07069 Neurospora crassa NCU07069 N 0.788
estExt_Genewise1.C_21744 Trichoderma virens estExt_Genewise1.C_21744 N 0.788
FVEG_03827 Fusarium verticillioides FVEG_03827 N 0.781
GLRG_08760 Colletotrichum graminicola GLRG_08760 N 0.781
FOXG_05959 Fusarium oxysporum FOXG_05959 N 0.781
estExt_fgenesh5_pg.C_160051 Trichoderma reesei estExt_fgenesh5_pg.C_160051 N 0.774
estExt_Genewise1Plus.C_51423 Myceliophthora thermophila estExt_Genewise1Plus.C_51423 N 0.766
VDAG_10099 Verticillium dahliae VDAG_10099 N 0.766
CHGG_09128 Chaetomium globosum CHGG_09128 N 0.766
SNOG_08449 Stagonospora nodorum SNOG_08449 N 0.752
e_gw1.18.2147.1 Nectria haematococca e_gw1.18.2147.1 N 0.745
e_gw1.5.1788.1 Thielavia terrestris e_gw1.5.1788.1 N 0.745
ANIA_04978 Aspergillus nidulans CADANIAG00005417 N 0.737
An16g03890 Aspergillus niger CADANGAG00012860 N 0.715
AFLA_032760 Aspergillus flavus CADAFLAG00002651 N 0.715
TEQG_05050 Trichophyton equinum TEQG_05050 N 0.715
fgenesh1_pm.00168_#_248 Aspergillus carbonarius fgenesh1_pm.00168_#_248 N 0.715
ACLA_037960 Aspergillus clavatus CADACLAG00003195 N 0.708
Pc13g10700 Penicillium chrysogenum Pc13g10700 N 0.701
Pa_4_8210 Podospora anserina Pa_4_8210 N 0.701
estExt_Genewise1.C_90037 Cryphonectria parasitica estExt_Genewise1.C_90037 N 0.701