estExt_fgenesh3_kg.C_60024 (Neurospora discreta)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 estExt_fgenesh3_kg.C_60024 T50959_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh3_kg.C_60024 RRM 9 73
estExt_fgenesh3_kg.C_60024 RRM 107 172

Links

Other RRM family RBPs
Other Neurospora discreta RBPs

33 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
NCU07069 Neurospora crassa NCU07069 N 1.000
estExt_fgenesh2_kg.C_20245 Neurospora tetrasperma estExt_fgenesh2_kg.C_20245 N 1.000
estExt_Genewise1Plus.C_51423 Myceliophthora thermophila estExt_Genewise1Plus.C_51423 N 0.916
estExt_Genewise1.C_21744 Trichoderma virens estExt_Genewise1.C_21744 N 0.894
CHGG_09128 Chaetomium globosum CHGG_09128 N 0.893
BC1G_09648 Botrytis cinerea BC1G_09648 N 0.886
SS1G_14437 Sclerotinia sclerotiorum SS1G_14437 N 0.886
fgenesh2_kg.10__63__CBWT_CBYP_CBYT_CCAH_1370_0_CBYT4195.b1 Trichoderma atroviride fgenesh2_kg.10__63__CBWT_CBYP_CBYT_CCAH_1370_0_CBYT4195.b1 N 0.886
FVEG_03827 Fusarium verticillioides FVEG_03827 N 0.879
FOXG_05959 Fusarium oxysporum FOXG_05959 N 0.879
estExt_fgenesh5_pg.C_160051 Trichoderma reesei estExt_fgenesh5_pg.C_160051 N 0.879
e_gw1.5.1788.1 Thielavia terrestris e_gw1.5.1788.1 N 0.870
GLRG_08760 Colletotrichum graminicola GLRG_08760 N 0.864
e_gw1.18.2147.1 Nectria haematococca e_gw1.18.2147.1 N 0.833
VDAG_10099 Verticillium dahliae VDAG_10099 N 0.833
ANIA_04978 Aspergillus nidulans CADANIAG00005417 N 0.818
AB02127.1 Alternaria brassicicola AB02127.1 N 0.815
Pa_4_8210 Podospora anserina Pa_4_8210 N 0.811
estExt_Genewise1.C_90037 Cryphonectria parasitica estExt_Genewise1.C_90037 N 0.802
estExt_Genewise1Plus.C_80545 Mycosphaerella fijiensis estExt_Genewise1Plus.C_80545 N 0.788
estExt_fgenesh1_pm.C_chr_20271 Mycosphaerella graminicola estExt_fgenesh1_pm.C_chr_20271 N 0.788
fgenesh1_pm.00168_#_248 Aspergillus carbonarius fgenesh1_pm.00168_#_248 N 0.788
An16g03890 Aspergillus niger CADANGAG00012860 N 0.788
TEQG_05050 Trichophyton equinum TEQG_05050 N 0.786
PTRG_11856 Pyrenophora tritici repentis PTRG_11856 N 0.785
ACLA_037960 Aspergillus clavatus CADACLAG00003195 N 0.780
AFLA_032760 Aspergillus flavus CADAFLAG00002651 N 0.780
CPSG_02395 Coccidioides posadasii CPSG_02395 N 0.779
CIMG_03560 Coccidioides immitis CIMG_03560 N 0.779
AO090003000544 Aspergillus oryzae CADAORAG00001164 N 0.758
Pc13g10700 Penicillium chrysogenum Pc13g10700 N 0.756
SNOG_08449 Stagonospora nodorum SNOG_08449 N 0.733
TESG_02526 Trichophyton tonsurans TESG_02526 N 0.702