AT5G04600 (Arabidopsis thaliana)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 AT5G04600-TAIR-G T32803_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
AT5G04600.1-P RRM 62 132

Links

Other RRM family RBPs
Other Arabidopsis thaliana RBPs

10 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XM_002871058.1 Arabidopsis lyrata scaffold_600404.1 N 1.000
Medtr8g129780 Medicago truncatula Medtr8g129780 N 0.761
B9HW06_POPTR Populus trichocarpa POPTR_0010s24120 N 0.746
GSVIVG00021851001 Vitis vinifera GSVIVG00021851001 N 0.732
29428.m000321 Ricinus communis 29428.m000321 N 0.732
Cucsa.364800 Cucumis sativus Cucsa.364800 N 0.718
Medtr1g137330 Medicago truncatula Medtr1g137330 N 0.718
ppa025985m Prunus persica ppa025985m N 0.718
LOC_Os08g31810 Oryza sativa LOC_Os08g31810 N 0.704
MDP0000340057 Malus x domestica MDP0000340057 N 0.704