Cucsa.364800 (Cucumis sativus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Cucsa.364800 T49656_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.364800.1 RRM 53 123
Cucsa.364800.2 RRM 53 123
Cucsa.364800.3 RRM 53 123
Cucsa.364800.4 RRM 53 123

Links

Other RRM family RBPs
Other Cucumis sativus RBPs

18 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GSVIVG00021851001 Vitis vinifera GSVIVG00021851001 N 0.845
Medtr8g129780 Medicago truncatula Medtr8g129780 N 0.831
Medtr1g137330 Medicago truncatula Medtr1g137330 N 0.817
MDP0000340057 Malus x domestica MDP0000340057 N 0.817
ppa025985m Prunus persica ppa025985m N 0.817
Glyma02g29190.1 Glycine max Glyma02g29190.1 N 0.817
Glyma09g17080.1 Glycine max Glyma09g17080.1 N 0.817
mgf009918m Mimulus guttatus mgf009918m N 0.789
LOC_Os08g31810 Oryza sativa LOC_Os08g31810 N 0.761
B9HW06_POPTR Populus trichocarpa POPTR_0010s24120 N 0.746
29428.m000321 Ricinus communis 29428.m000321 N 0.746
Sb03g045720 Sorghum bicolor Sb03g045720 N 0.746
BRADI3G35650 Brachypodium distachyon BRADI3G35650 N 0.732
PK02111.1 Cannabis sativa PK02111.1 N 0.732
XM_002871058.1 Arabidopsis lyrata scaffold_600404.1 N 0.718
AT5G04600 Arabidopsis thaliana AT5G04600-TAIR-G N 0.718
GRMZM2G056350 Zea mays GRMZM2G056350 N 0.704