An04g01360 (Aspergillus niger)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 CADANGAG00003845 T33548_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
CADANGAP00003756 RRM 477 533

Links

Other RRM family RBPs
Other Aspergillus niger RBPs

19 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
fgenesh1_pg.00609_#_525 Aspergillus carbonarius fgenesh1_pg.00609_#_525 N 0.965
AO090023000898 Aspergillus oryzae CADAORAG00007984 N 0.895
ACLA_046120 Aspergillus clavatus CADACLAG00004343 N 0.895
AFLA_113070 Aspergillus flavus CADAFLAG00005041 N 0.895
AFUA_4G06840 Aspergillus fumigatus CADAFUAG00007720 N 0.895
NFIA_109400 Neosartorya fischeri CADNFIAG00009700 N 0.895
ATEG_05545 Aspergillus terreus CADATEAG00004689 N 0.877
ANIA_04398 Aspergillus nidulans CADANIAG00006059 N 0.877
CPSG_03148 Coccidioides posadasii CPSG_03148 N 0.807
SS1G_10570 Sclerotinia sclerotiorum SS1G_10570 N 0.789
BC1G_10628 Botrytis cinerea BC1G_10628 N 0.789
MCYG_01323 Microsporum canis MCYG_01323 N 0.789
TESG_01518 Trichophyton tonsurans TESG_01518 N 0.772
MGYG_01864 Microsporum gypseum MGYG_01864 N 0.772
PMAA_027430 Penicillium marneffei PMAA_027430 N 0.772
TERG_04597 Trichophyton rubrum TERG_04597 N 0.772
TEQG_06875 Trichophyton equinum TEQG_06875 N 0.772
UREG_05557 Uncinocarpus reesii UREG_05557 N 0.754
PABG_04139 Paracoccidioides brasiliensis PABG_04139 N 0.719