An07g05350 (Aspergillus niger)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 CADANGAG00005807 T33554_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
CADANGAP00005693 RRM 667 734
CADANGAP00005693 RRM 743 808
CADANGAP00005693 RRM 834 902
CADANGAP00005693 RRM 952 1017

Links

Other RRM family RBPs
Other Aspergillus niger RBPs

8 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
fgenesh1_pg.00771_#_298 Aspergillus carbonarius fgenesh1_pg.00771_#_298 N 0.959
AFLA_042700 Aspergillus flavus CADAFLAG00005597 N 0.807
AO090011000439 Aspergillus oryzae CADAORAG00005193 N 0.807
ATEG_05757 Aspergillus terreus CADATEAG00002080 N 0.804
ANIA_10574 Aspergillus nidulans CADANIAG00005779 N 0.784
NFIA_034170 Neosartorya fischeri CADNFIAG00003174 N 0.781
ACLA_093160 Aspergillus clavatus CADACLAG00008305 N 0.777
AFUA_2G01820 Aspergillus fumigatus CADAFUAG00003778 N 0.770