CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CPIJ015641
(
Culex quinquefasciatus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
CPIJ015641
T34324_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CPIJ015641-PA
RRM
36
106
IFVGGLPSELTEGDLLAVFSQYGEIVNINLVRDRKTGKSKGFGFICFEDQRSTVLTVDNLNGIKLLGRTLR
Links
Other
RRM
family RBPs
Other
Culex quinquefasciatus
RBPs
54 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CpipJ_CPIJ015641
Culex pipiens
CpipJ_CPIJ015641
N
1.000
AAEL002461
Aedes aegypti
AAEL002461
N
0.878
ENSOCUG00000020937
Oryctolagus cuniculus
ENSOCUG00000020937
N
0.817
ENSLAFG00000028277
Loxodonta africana
ENSLAFG00000028277
N
0.770
AGAP000977
Anopheles gambiae
AGAP000977
N
0.770
LOAG_03303
Loa loa
LOAG_03303
N
0.761
AAH56844
Xenopus laevis
AAH56844
N
0.761
Smp_170230
Schistosoma mansoni
Smp_170230
N
0.761
Sjc_0109550
Schistosoma japonicum
Sjc_0109550
N
0.761
RBMX2
Oryzias latipes
ENSORLG00000013183
N
0.757
RBMX2
Gasterosteus aculeatus
ENSGACG00000001855
N
0.757
SPPG_01752
Spizellomyces punctatus
SPPG_01752
N
0.746
nasonia_NCBI_hmm382923
Nasonia vitripennis
nasonia_NCBI_hmm382923
N
0.743
GK14925
Drosophila willistoni
FBgn0216930
N
0.743
Rbmx2
Mus musculus
ENSMUSG00000031107
N
0.733
GF14433
Drosophila ananassae
FBgn0091460
N
0.730
GM17378
Drosophila sechellia
FBgn0172288
N
0.730
GE13281
Drosophila yakuba
FBgn0230967
N
0.730
XP_791635.2
Strongylocentrotus purpuratus
XP_791635.2
N
0.730
XP_002164481.1
Hydra magnipapillata
XP_002164481.1
N
0.730
XP_001180915.1
Strongylocentrotus purpuratus
XP_001180915.1
N
0.730
GD24233
Drosophila simulans
FBgn0195582
N
0.730
CG10466
Drosophila melanogaster
FBgn0032822
N
0.730
RBMX2
Spermophilus tridecemlineatus
ENSSTOG00000015391
N
0.720
RBMX2
Anolis carolinensis
ENSACAG00000008819
N
0.720
Rbmx2
Rattus norvegicus
ENSRNOG00000007371
N
0.720
estExt_fgenesh2_pg.C_1800064
Branchiostoma floridae
estExt_fgenesh2_pg.C_1800064
N
0.716
fgenesh2_pg.C_sca_10000115
Lottia gigantea
fgenesh2_pg.C_sca_10000115
N
0.716
RBMX2
Sorex araneus
ENSSARG00000007350
N
0.716
GH13830
Drosophila grimshawi
FBgn0121306
N
0.716
GG21207
Drosophila erecta
FBgn0113387
N
0.716
ENSMLUG00000017095
Myotis lucifugus
ENSMLUG00000017095
N
0.716
ENSMLUG00000010298
Myotis lucifugus
ENSMLUG00000010298
N
0.707
RBMX2
Homo sapiens
ENSG00000134597
N
0.707
RBMX2
Gorilla gorilla
ENSGGOG00000023687
N
0.707
RBMX2
Macropus eugenii
ENSMEUG00000010913
N
0.707
RBMX2
Microcebus murinus
ENSMICG00000015139
N
0.707
Ame_R006638
Ailuropoda melanoleuca
Ame_R006638
N
0.707
XM_001377711.1
Monodelphis domestica
ENSMODG00000012002
N
0.707
RBMX2
Pteropus vampyrus
ENSPVAG00000004425
N
0.707
RBMX2
Cavia porcellus
ENSCPOG00000006640
N
0.707
RBMX2
Tursiops truncatus
ENSTTRG00000016210
N
0.707
ENSOGAG00000006237
Otolemur garnettii
ENSOGAG00000006237
N
0.707
LOC100058600
Equus caballus
ENSECAG00000008257
N
0.707
RBMX2
Macaca mulatta
ENSMMUG00000008389
N
0.707
XP_001110036.1
Macaca mulatta
ENSMMUG00000020845
N
0.707
LOC100388331
Callithrix jacchus
ENSCJAG00000002436
N
0.707
GA10331-RA
Drosophila pseudoobscura
FBgn0070389
N
0.703
GL26176
Drosophila persimilis
FBgn0163758
N
0.703
RBMX2
Tetraodon nigroviridis
ENSTNIG00000007672
N
0.703
GJ13600
Drosophila virilis
FBgn0200822
N
0.703
Aqu1.200557
Amphimedon queenslandica
Aqu1.200557
N
0.703
Aqu1.228439
Amphimedon queenslandica
Aqu1.228439
N
0.703
e_gw1.98.15.1
Volvox carteri
e_gw1.98.15.1
N
0.703